Experiment: propionate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_1737 and Psest_1738 are separated by 15 nucleotides Psest_1738 and Psest_1739 are separated by 91 nucleotides Psest_1739 and Psest_1740 are separated by 17 nucleotides
Psest_1737: Psest_1737 - flagellar biosynthesis protein FlhA, at 1,840,957 to 1,843,077
_1737
Psest_1738: Psest_1738 - flagellar biosynthetic protein FlhF, at 1,843,093 to 1,844,382
_1738
Psest_1739: Psest_1739 - ATPases involved in chromosome partitioning, at 1,844,474 to 1,845,301
_1739
Psest_1740: Psest_1740 - RNA polymerase sigma factor, FliA/WhiG family, at 1,845,319 to 1,846,044
_1740
Position (kb)
1843
1844
1845 Strain fitness (log2 ratio)
-2
-1
0
1
2
3
4 at 1842.412 kb on + strand, within Psest_1737 at 1842.413 kb on - strand, within Psest_1737 at 1842.413 kb on - strand, within Psest_1737 at 1843.794 kb on - strand, within Psest_1738 at 1843.801 kb on + strand, within Psest_1738 at 1843.801 kb on + strand, within Psest_1738 at 1844.056 kb on + strand, within Psest_1738 at 1844.056 kb on + strand, within Psest_1738 at 1844.056 kb on + strand, within Psest_1738 at 1844.057 kb on - strand, within Psest_1738 at 1844.113 kb on + strand, within Psest_1738 at 1844.139 kb on + strand, within Psest_1738 at 1844.139 kb on + strand, within Psest_1738 at 1844.180 kb on + strand, within Psest_1738 at 1844.180 kb on + strand, within Psest_1738 at 1844.218 kb on + strand, within Psest_1738 at 1844.337 kb on + strand at 1844.459 kb on + strand at 1844.459 kb on + strand at 1844.459 kb on + strand at 1844.459 kb on + strand at 1844.461 kb on + strand at 1844.461 kb on + strand at 1844.461 kb on + strand at 1844.461 kb on + strand at 1844.461 kb on + strand at 1844.461 kb on + strand at 1844.461 kb on + strand at 1845.319 kb on - strand at 1845.322 kb on + strand at 1845.322 kb on + strand at 1845.322 kb on + strand at 1845.322 kb on + strand at 1845.322 kb on + strand at 1845.322 kb on + strand at 1845.322 kb on + strand at 1845.322 kb on + strand at 1845.322 kb on + strand at 1845.322 kb on + strand at 1845.322 kb on + strand at 1845.322 kb on + strand at 1845.322 kb on + strand at 1845.322 kb on + strand at 1845.323 kb on - strand at 1845.323 kb on - strand at 1845.323 kb on - strand at 1845.323 kb on - strand at 1845.323 kb on - strand at 1845.323 kb on - strand at 1845.323 kb on - strand at 1845.323 kb on - strand at 1845.323 kb on - strand at 1845.323 kb on - strand at 1845.323 kb on - strand at 1845.323 kb on - strand at 1845.326 kb on - strand at 1845.326 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction propionate (C) remove 1,842,412 + Psest_1737 0.69 +2.1 1,842,413 - Psest_1737 0.69 -1.5 1,842,413 - Psest_1737 0.69 +0.7 1,843,794 - Psest_1738 0.54 +2.6 1,843,801 + Psest_1738 0.55 -0.1 1,843,801 + Psest_1738 0.55 +1.3 1,844,056 + Psest_1738 0.75 +2.5 1,844,056 + Psest_1738 0.75 +1.1 1,844,056 + Psest_1738 0.75 -1.5 1,844,057 - Psest_1738 0.75 +0.4 1,844,113 + Psest_1738 0.79 +3.1 1,844,139 + Psest_1738 0.81 +0.7 1,844,139 + Psest_1738 0.81 +1.9 1,844,180 + Psest_1738 0.84 +1.1 1,844,180 + Psest_1738 0.84 +3.2 1,844,218 + Psest_1738 0.87 +1.3 1,844,337 + +0.4 1,844,459 + -0.7 1,844,459 + -0.6 1,844,459 + -1.3 1,844,459 + -1.9 1,844,461 + +0.0 1,844,461 + +0.5 1,844,461 + -1.5 1,844,461 + -0.1 1,844,461 + -2.4 1,844,461 + -0.0 1,844,461 + +1.0 1,845,319 - +0.3 1,845,322 + +0.1 1,845,322 + -0.0 1,845,322 + +1.2 1,845,322 + +3.1 1,845,322 + +1.8 1,845,322 + +2.3 1,845,322 + -1.7 1,845,322 + +1.6 1,845,322 + -0.9 1,845,322 + +0.3 1,845,322 + +2.4 1,845,322 + +1.9 1,845,322 + +0.3 1,845,322 + -0.2 1,845,323 - -0.9 1,845,323 - +0.2 1,845,323 - -0.5 1,845,323 - +3.8 1,845,323 - -0.9 1,845,323 - +0.7 1,845,323 - +0.1 1,845,323 - -0.8 1,845,323 - -1.1 1,845,323 - -1.4 1,845,323 - +0.2 1,845,323 - -0.2 1,845,326 - +1.1 1,845,326 - -0.1
Or see this region's nucleotide sequence