Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_0121

Experiment: propionate (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	propionate (C)
115,325	+		Psest_0118	0.55	+0.8
115,325	+		Psest_0118	0.55	+1.2
115,325	+		Psest_0118	0.55	-0.5
115,325	+		Psest_0118	0.55	-0.3
115,325	+		Psest_0118	0.55	-1.7
115,326	-		Psest_0118	0.55	+0.7
115,326	-		Psest_0118	0.55	-0.2
115,326	-		Psest_0118	0.55	+1.4
115,326	-		Psest_0118	0.55	+0.5
115,326	-		Psest_0118	0.55	-1.0
115,326	-		Psest_0118	0.55	-0.5
115,326	-		Psest_0118	0.55	+0.3
115,326	-		Psest_0118	0.55	-0.7
115,473	+		Psest_0118	0.87	-0.3
115,474	-		Psest_0118	0.87	+0.7
115,474	-		Psest_0118	0.87	+1.1
115,474	-		Psest_0118	0.87	-0.6
115,650	+		Psest_0119	0.45	-0.9
115,650	+		Psest_0119	0.45	+1.0
115,651	-		Psest_0119	0.46	-0.4
115,651	-		Psest_0119	0.46	+0.4
115,651	-		Psest_0119	0.46	-0.4
115,834	-				-1.7
115,907	-				-1.1
115,907	-				-0.3
115,907	-				-0.3
115,907	-				+1.3
115,907	-				-1.3
115,907	-				+0.8
115,907	-				-0.4
115,907	-				-1.5
115,933	-				-0.9
115,933	-				-1.5
115,933	-				+0.1
115,933	-				-2.6
115,933	-				+0.1
115,985	-				+0.2
115,985	-				-0.6
115,988	-				-1.3
115,991	+				-0.2
116,026	+		Psest_0120	0.14	-0.1
116,065	-		Psest_0120	0.26	-0.3
116,090	+		Psest_0120	0.33	-0.1
116,090	+		Psest_0120	0.33	+0.4
116,091	-		Psest_0120	0.33	+1.3
116,091	-		Psest_0120	0.33	-0.2
116,164	+		Psest_0120	0.54	-1.1
116,166	+		Psest_0120	0.55	-0.6
116,166	+		Psest_0120	0.55	-0.8
116,203	-		Psest_0120	0.66	-1.7
116,238	+		Psest_0120	0.76	-0.7
116,239	-		Psest_0120	0.76	-0.1
116,239	-		Psest_0120	0.76	-1.8
116,239	-		Psest_0120	0.76	+0.2
116,288	+				+0.4
116,288	+				-0.4
116,288	+				+0.2
116,288	+				-0.1
116,289	-				+0.1
116,320	+				-0.6
116,321	-				-1.3
116,339	-				+1.3
116,342	+				+0.3
116,342	+				+0.6
116,342	+				-2.1
116,342	+				+0.3
116,342	+				+0.3
116,343	-				-0.6
116,389	+				-1.3
116,567	+		Psest_0121	0.20	+0.3
116,567	+		Psest_0121	0.20	-0.3
116,567	+		Psest_0121	0.20	+1.7
116,568	-		Psest_0121	0.20	-0.4
116,568	-		Psest_0121	0.20	-0.5
116,656	+		Psest_0121	0.27	+0.3
116,657	-		Psest_0121	0.27	-0.3
116,657	-		Psest_0121	0.27	+1.3
116,662	-		Psest_0121	0.27	-0.8
116,771	+		Psest_0121	0.36	+0.0
116,775	+		Psest_0121	0.36	+1.7
116,775	+		Psest_0121	0.36	-1.4
116,776	-		Psest_0121	0.36	+1.4
116,820	-		Psest_0121	0.40	+0.9
116,820	-		Psest_0121	0.40	+0.6
116,884	+		Psest_0121	0.45	+1.5
116,884	+		Psest_0121	0.45	-0.8
116,884	+		Psest_0121	0.45	+0.2
116,938	+		Psest_0121	0.49	-0.4
116,938	+		Psest_0121	0.49	+0.4
116,938	+		Psest_0121	0.49	-0.9
116,938	+		Psest_0121	0.49	+1.1
116,938	+		Psest_0121	0.49	+0.1
117,007	-		Psest_0121	0.55	-1.5
117,007	-		Psest_0121	0.55	+1.3
117,055	+		Psest_0121	0.59	-0.1
117,055	+		Psest_0121	0.59	+1.8
117,055	+		Psest_0121	0.59	+1.2
117,056	-		Psest_0121	0.59	+1.1
117,056	-		Psest_0121	0.59	+2.0
117,056	-		Psest_0121	0.59	+0.6
117,056	-		Psest_0121	0.59	+0.9
117,056	-		Psest_0121	0.59	+0.1
117,056	-		Psest_0121	0.59	-0.1
117,289	+		Psest_0121	0.77	-2.1
117,289	+		Psest_0121	0.77	+1.0
117,289	+		Psest_0121	0.77	+2.1
117,289	+		Psest_0121	0.77	-0.5
117,290	-		Psest_0121	0.78	+0.6
117,290	-		Psest_0121	0.78	-0.5
117,290	-		Psest_0121	0.78	-1.5
117,290	-		Psest_0121	0.78	-2.0
117,290	-		Psest_0121	0.78	+1.8
117,290	-		Psest_0121	0.78	-0.9
117,301	+		Psest_0121	0.78	+0.7
117,301	+		Psest_0121	0.78	+1.2
117,301	+		Psest_0121	0.78	-0.2
117,301	+		Psest_0121	0.78	+0.7
117,301	+		Psest_0121	0.78	+1.9
117,301	+		Psest_0121	0.78	-0.0
117,301	+		Psest_0121	0.78	+1.2
117,301	+		Psest_0121	0.78	-0.3
117,301	+		Psest_0121	0.78	+1.5
117,301	+		Psest_0121	0.78	+0.7
117,301	+		Psest_0121	0.78	+1.6
117,301	+		Psest_0121	0.78	+0.7
117,301	+		Psest_0121	0.78	+0.1
117,301	+		Psest_0121	0.78	+0.6
117,301	+		Psest_0121	0.78	-0.1
117,302	-		Psest_0121	0.79	-0.6
117,302	-		Psest_0121	0.79	+0.8
117,302	-		Psest_0121	0.79	+1.1
117,302	-		Psest_0121	0.79	-0.1
117,302	-		Psest_0121	0.79	-0.3
117,302	-		Psest_0121	0.79	+2.0
117,302	-		Psest_0121	0.79	-0.1
117,337	+		Psest_0121	0.81	+2.6
117,338	-		Psest_0121	0.81	+0.8
117,338	-		Psest_0121	0.81	+2.4
117,338	-		Psest_0121	0.81	+0.5
117,562	+				-0.5
117,562	+				+2.2
117,563	-				+0.5
117,563	-				+0.3
117,563	-				-0.2
117,563	-				+1.3
117,659	+				+0.4
117,659	+				-0.1
117,660	-				-1.8
117,660	-				+0.8
117,660	-				-0.9
117,660	-				+0.1
117,708	+		Psest_0122	0.16	+2.6
117,708	+		Psest_0122	0.16	-1.5
117,709	-		Psest_0122	0.16	+0.1
117,831	-		Psest_0122	0.30	-0.9
118,068	+		Psest_0122	0.58	+1.5
118,068	+		Psest_0122	0.58	-2.7
118,069	-		Psest_0122	0.58	+1.8
118,069	-		Psest_0122	0.58	+0.5
118,230	+		Psest_0122	0.77	-0.2
118,230	+		Psest_0122	0.77	+0.6
118,230	+		Psest_0122	0.77	+1.4
118,231	-		Psest_0122	0.77	-0.6
118,279	-		Psest_0122	0.82	-1.8
118,314	+		Psest_0122	0.86	+0.8
118,314	+		Psest_0122	0.86	+0.8
118,314	+		Psest_0122	0.86	+0.4
118,314	+		Psest_0122	0.86	-1.4
118,314	+		Psest_0122	0.86	-0.3
118,314	+		Psest_0122	0.86	-1.1
118,315	-		Psest_0122	0.87	-0.8
118,315	-		Psest_0122	0.87	-0.6
118,315	-		Psest_0122	0.87	-0.7
118,359	+				-1.4
118,360	-				-0.1
118,360	-				-1.3
118,360	-				-1.0
118,360	-				+0.1
118,391	+				+2.4
118,391	+				+0.0
118,391	+				+2.1
118,391	+				+0.2
118,391	+				-1.1
118,392	-				-0.3
118,392	-				+0.6
118,392	-				+0.4
118,392	-				+1.1
118,392	-				+1.0
118,392	-				+0.5