Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_0993

Experiment: propionate (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	propionate (C)
1,074,883	+		Psest_0992	0.27	-0.9
1,074,883	+		Psest_0992	0.27	+0.7
1,074,893	-		Psest_0992	0.28	+1.7
1,074,893	-		Psest_0992	0.28	-2.0
1,074,893	-		Psest_0992	0.28	-0.4
1,074,945	-		Psest_0992	0.34	-0.3
1,074,945	-		Psest_0992	0.34	-0.1
1,075,019	+		Psest_0992	0.43	-1.5
1,075,019	+		Psest_0992	0.43	+1.6
1,075,022	+		Psest_0992	0.43	-0.4
1,075,023	-		Psest_0992	0.43	-0.7
1,075,448	+				+0.2
1,075,555	+				+0.3
1,075,558	+				+0.3
1,075,558	+				-0.4
1,075,558	+				+0.7
1,075,558	+				-1.6
1,075,558	+				+0.7
1,075,559	-				+0.2
1,075,559	-				+0.4
1,075,757	-				-0.9
1,075,853	-		Psest_0993	0.11	-0.3
1,076,057	-		Psest_0993	0.24	-1.1
1,076,156	-		Psest_0993	0.29	-0.6
1,076,296	+		Psest_0993	0.38	+0.5
1,076,296	+		Psest_0993	0.38	+1.3
1,076,296	+		Psest_0993	0.38	-2.1
1,076,296	+		Psest_0993	0.38	-0.6
1,076,297	-		Psest_0993	0.38	+1.0
1,076,297	-		Psest_0993	0.38	-2.4
1,076,305	+		Psest_0993	0.38	-1.4
1,076,306	-		Psest_0993	0.38	-0.1
1,076,320	+		Psest_0993	0.39	-1.2
1,076,321	-		Psest_0993	0.39	-2.3
1,076,420	+		Psest_0993	0.45	-1.5
1,076,420	+		Psest_0993	0.45	-1.1
1,076,420	+		Psest_0993	0.45	-1.7
1,076,425	+		Psest_0993	0.46	-3.5
1,076,425	+		Psest_0993	0.46	-1.6
1,076,425	+		Psest_0993	0.46	+0.7
1,076,425	+		Psest_0993	0.46	-1.2
1,076,506	+		Psest_0993	0.51	-0.6
1,076,642	-		Psest_0993	0.59	+0.2
1,076,779	+		Psest_0993	0.67	-2.0
1,076,779	+		Psest_0993	0.67	-1.8
1,076,779	+		Psest_0993	0.67	-2.8
1,076,780	-		Psest_0993	0.67	-2.8
1,076,780	-		Psest_0993	0.67	-2.1
1,076,780	-		Psest_0993	0.67	-1.2
1,076,780	-		Psest_0993	0.67	-1.6
1,076,814	+		Psest_0993	0.69	+1.0
1,077,319	+				-1.9
1,077,319	+				+1.0
1,077,319	+				+1.7
1,077,322	+				-1.7
1,077,322	+				-1.8
1,077,322	+				-0.5
1,077,322	+				-1.6
1,077,322	+				-2.1
1,077,322	+				-0.9
1,077,323	-				-1.6
1,077,323	-				-3.1
1,077,323	-				-2.6
1,077,323	-				-3.1
1,077,323	-				-1.5
1,077,323	-				+0.2
1,077,323	-				-1.0
1,077,323	-				-2.1
1,077,415	+				-0.4
1,077,415	+				-0.6
1,077,415	+				-1.1
1,077,415	+				-1.1
1,077,415	+				-1.5
1,077,415	+				-1.2
1,077,415	+				+3.1
1,077,415	+				+0.4
1,077,415	+				-2.4
1,077,415	+				-0.5
1,077,415	+				+0.2
1,077,415	+				-2.5
1,077,415	+				-2.3
1,077,415	+				-1.0
1,077,415	+				+0.4
1,077,416	-				+0.1
1,077,416	-				-1.7
1,077,416	-				+1.7
1,077,416	-				+0.6
1,077,416	-				+0.0
1,077,419	+				-2.3
1,077,419	+				-2.0
1,077,419	+				-0.7
1,077,419	+				-1.1
1,077,419	+				+0.9
1,077,419	+				+1.6
1,077,419	+				-1.3
1,077,419	+				+0.1
1,077,419	+				-0.6
1,077,419	+				-0.5
1,077,419	+				-1.4
1,077,419	+				-1.7
1,077,419	+				-0.7
1,077,419	+				+0.1
1,077,419	+				-0.1
1,077,419	+				-0.4
1,077,419	+				-0.8
1,077,419	+				-1.0
1,077,419	+				-0.3
1,077,419	+				-0.8
1,077,419	+				-1.4
1,077,419	+				+0.9
1,077,419	+				-0.4
1,077,419	+				-2.0
1,077,419	+				-2.0
1,077,419	+				-1.7
1,077,419	+				+0.3
1,077,419	+				-1.4
1,077,419	+				-0.6
1,077,419	+				-2.3
1,077,419	+				-1.7
1,077,419	+				-0.7
1,077,419	+				-1.7
1,077,419	+				-1.7
1,077,419	+				+0.6
1,077,419	+				-1.8
1,077,419	+				-0.8
1,077,419	+				-0.8
1,077,419	+				-0.2
1,077,419	+				+0.6
1,077,419	+				-1.1
1,077,419	+				-1.5
1,077,419	+				+0.3
1,077,419	+				-0.2
1,077,419	+				-1.7
1,077,420	-				+1.6
1,077,420	-				-1.1
1,077,420	-				-1.5
1,077,420	-				-0.2
1,077,420	-				-0.6
1,077,420	-				+0.8
1,077,420	-				+0.7
1,077,420	-				+3.2
1,077,420	-				-1.1
1,077,420	-				-0.8
1,077,420	-				-2.2
1,077,420	-				-1.0
1,077,420	-				-1.7
1,077,420	-				+0.1
1,077,420	-				-0.1
1,077,507	+				+0.6
1,077,507	+				-0.3
1,077,507	+				-1.4
1,077,507	+				-1.2
1,077,507	+				+0.6
1,077,507	+				+0.9
1,077,567	+				+0.1
1,077,567	+				+1.0
1,077,567	+				-0.5
1,077,567	+				-0.1
1,077,747	+		Psest_0994	0.16	-0.4
1,077,747	+		Psest_0994	0.16	-1.5
1,077,747	+		Psest_0994	0.16	-0.8
1,077,747	+		Psest_0994	0.16	-0.8
1,077,747	+		Psest_0994	0.16	+0.4
1,077,747	+		Psest_0994	0.16	+1.0
1,077,747	+		Psest_0994	0.16	-0.1
1,077,748	-		Psest_0994	0.16	+0.9
1,077,748	-		Psest_0994	0.16	+0.3
1,077,748	-		Psest_0994	0.16	+1.5
1,077,748	-		Psest_0994	0.16	-0.4
1,077,748	-		Psest_0994	0.16	+1.3
1,077,748	-		Psest_0994	0.16	+0.6
1,077,748	-		Psest_0994	0.16	-0.4
1,077,748	-		Psest_0994	0.16	-0.4
1,077,789	+		Psest_0994	0.27	+3.1
1,077,789	+		Psest_0994	0.27	-1.3
1,077,790	-		Psest_0994	0.27	+3.5
1,077,790	-		Psest_0994	0.27	+1.5
1,077,895	-		Psest_0994	0.55	+5.0
1,077,895	-		Psest_0994	0.55	-1.3
1,077,895	-		Psest_0994	0.55	-0.4
1,077,895	-		Psest_0994	0.55	+0.2
1,077,926	-		Psest_0994	0.63	-0.6
1,077,927	+		Psest_0994	0.63	-0.8
1,077,927	+		Psest_0994	0.63	+0.8
1,077,927	+		Psest_0994	0.63	-0.1
1,077,927	+		Psest_0994	0.63	+1.4
1,077,927	+		Psest_0994	0.63	-0.2
1,077,927	+		Psest_0994	0.63	+1.3
1,077,927	+		Psest_0994	0.63	+0.9
1,077,928	-		Psest_0994	0.64	-0.3
1,077,928	-		Psest_0994	0.64	+0.9
1,077,928	-		Psest_0994	0.64	+0.5
1,077,928	-		Psest_0994	0.64	-0.3
1,077,928	-		Psest_0994	0.64	+1.8
1,077,928	-		Psest_0994	0.64	+2.3
1,077,945	+		Psest_0994	0.68	+0.4
1,077,946	-		Psest_0994	0.68	-0.5
1,077,946	-		Psest_0994	0.68	+1.0