Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_3340

Experiment: propionate (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	propionate (C)
3,503,920	-		Psest_3339	0.44	+1.4
3,503,921	+		Psest_3339	0.44	+0.4
3,503,922	-		Psest_3339	0.44	+1.1
3,504,216	+		Psest_3339	0.68	+1.8
3,504,216	+		Psest_3339	0.68	+1.4
3,504,216	+		Psest_3339	0.68	+3.0
3,504,217	-		Psest_3339	0.68	+0.5
3,504,217	-		Psest_3339	0.68	-1.1
3,504,217	-		Psest_3339	0.68	-0.5
3,504,219	-		Psest_3339	0.68	-0.2
3,504,255	-		Psest_3339	0.71	-1.2
3,504,255	-		Psest_3339	0.71	-0.5
3,504,299	+		Psest_3339	0.74	+0.4
3,504,302	+		Psest_3339	0.75	+2.0
3,504,303	-		Psest_3339	0.75	+1.2
3,504,303	-		Psest_3339	0.75	-0.9
3,504,338	+		Psest_3339	0.78	+0.9
3,504,338	+		Psest_3339	0.78	+1.9
3,504,338	+		Psest_3339	0.78	+1.9
3,504,338	+		Psest_3339	0.78	+1.9
3,504,338	+		Psest_3339	0.78	+1.6
3,504,339	-		Psest_3339	0.78	+1.8
3,504,339	-		Psest_3339	0.78	-0.6
3,504,387	-		Psest_3339	0.81	+0.8
3,504,614	+				+2.2
3,504,614	+				+1.0
3,504,614	+				+1.2
3,504,614	+				+4.2
3,504,615	-				-1.8
3,504,615	-				+0.8
3,504,615	-				-0.9
3,504,615	-				+0.3
3,504,615	-				-1.2
3,504,615	-				+3.5
3,504,615	-				-0.7
3,504,615	-				+4.6
3,504,615	-				+0.5
3,504,643	+				+1.0
3,504,644	-				-1.7
3,504,644	-				-0.2
3,504,644	-				+0.6
3,504,723	-				-0.5
3,504,928	+		Psest_3340	0.22	+2.4
3,504,928	+		Psest_3340	0.22	-0.1
3,504,929	-		Psest_3340	0.22	-0.9
3,504,929	-		Psest_3340	0.22	+2.2
3,505,054	+		Psest_3340	0.40	+0.7
3,505,063	+		Psest_3340	0.41	+1.0
3,505,188	+		Psest_3340	0.59	+0.8
3,505,192	+		Psest_3340	0.60	+1.4
3,505,192	+		Psest_3340	0.60	+5.2
3,505,192	+		Psest_3340	0.60	-2.3
3,505,192	+		Psest_3340	0.60	+0.1
3,505,192	+		Psest_3340	0.60	+0.1
3,505,192	+		Psest_3340	0.60	-0.3
3,505,192	+		Psest_3340	0.60	+1.8
3,505,192	+		Psest_3340	0.60	-0.4
3,505,193	-		Psest_3340	0.60	+0.3
3,505,193	-		Psest_3340	0.60	+0.8
3,505,193	-		Psest_3340	0.60	+0.3
3,505,193	-		Psest_3340	0.60	-1.6
3,505,193	-		Psest_3340	0.60	-0.4
3,505,193	-		Psest_3340	0.60	+0.5
3,505,193	-		Psest_3340	0.60	+0.7
3,505,193	-		Psest_3340	0.60	+1.8
3,505,193	-		Psest_3340	0.60	+0.2
3,505,193	-		Psest_3340	0.60	+3.7
3,505,309	+		Psest_3340	0.76	+1.6
3,505,326	-		Psest_3340	0.79	+0.7
3,505,326	-		Psest_3340	0.79	+2.7
3,505,504	+				+0.3
3,505,504	+				-0.5
3,505,504	+				-0.6
3,505,504	+				+1.2
3,505,504	+				+1.8
3,505,504	+				+0.3
3,505,505	-				+1.1
3,505,508	+				-1.1
3,505,509	-				-0.9
3,505,509	-				-1.1
3,505,509	-				+0.6
3,505,509	-				-2.3
3,505,509	-				-1.3
3,505,509	-				-0.3
3,505,509	-				-1.8
3,505,509	-				-0.6
3,505,517	-				-0.9
3,505,537	-				-0.8
3,505,548	-				-0.5
3,505,642	+				-1.5
3,505,642	+				+2.1
3,505,642	+				+2.7
3,505,643	-				+0.1
3,505,643	-				-0.6
3,505,661	+				+0.0
3,505,662	-				+0.8
3,505,846	-				-0.8
3,505,846	-				+1.4
3,505,847	+				-0.1
3,505,848	-				+0.6
3,505,953	+		Psest_3341	0.13	+0.8
3,505,953	+		Psest_3341	0.13	+0.1
3,505,954	-		Psest_3341	0.13	-0.2
3,505,954	-		Psest_3341	0.13	+0.2
3,506,040	-		Psest_3341	0.17	+0.0
3,506,040	-		Psest_3341	0.17	+0.9
3,506,098	+		Psest_3341	0.20	-0.4
3,506,099	-		Psest_3341	0.20	+0.0
3,506,132	+		Psest_3341	0.21	+0.8
3,506,208	+		Psest_3341	0.25	-0.7
3,506,233	+		Psest_3341	0.26	+0.8
3,506,233	+		Psest_3341	0.26	+0.9
3,506,233	+		Psest_3341	0.26	+1.3
3,506,233	+		Psest_3341	0.26	+1.6
3,506,233	+		Psest_3341	0.26	-0.8
3,506,233	+		Psest_3341	0.26	-0.0
3,506,233	+		Psest_3341	0.26	+0.8
3,506,233	+		Psest_3341	0.26	+0.6
3,506,233	+		Psest_3341	0.26	-0.2
3,506,233	+		Psest_3341	0.26	+1.7
3,506,233	+		Psest_3341	0.26	+0.5
3,506,233	+		Psest_3341	0.26	+0.5
3,506,234	-		Psest_3341	0.26	+0.9
3,506,234	-		Psest_3341	0.26	-2.2
3,506,234	-		Psest_3341	0.26	+0.3
3,506,234	-		Psest_3341	0.26	-1.7
3,506,234	-		Psest_3341	0.26	-0.2
3,506,234	-		Psest_3341	0.26	+0.0
3,506,234	-		Psest_3341	0.26	+1.5
3,506,234	-		Psest_3341	0.26	-1.0
3,506,234	-		Psest_3341	0.26	-0.1
3,506,234	-		Psest_3341	0.26	+1.4
3,506,234	-		Psest_3341	0.26	-0.1
3,506,234	-		Psest_3341	0.26	+0.7
3,506,234	-		Psest_3341	0.26	-1.1
3,506,234	-		Psest_3341	0.26	-0.5
3,506,234	-		Psest_3341	0.26	+1.1
3,506,234	-		Psest_3341	0.26	+1.3
3,506,234	-		Psest_3341	0.26	-0.7
3,506,234	-		Psest_3341	0.26	-1.8
3,506,234	-		Psest_3341	0.26	+0.8
3,506,234	-		Psest_3341	0.26	+0.2
3,506,234	-		Psest_3341	0.26	+0.7
3,506,234	-		Psest_3341	0.26	+1.0
3,506,234	-		Psest_3341	0.26	+0.2
3,506,234	-		Psest_3341	0.26	+0.6
3,506,234	-		Psest_3341	0.26	+0.3
3,506,234	-		Psest_3341	0.26	+0.0
3,506,234	-		Psest_3341	0.26	-0.8
3,506,234	-		Psest_3341	0.26	+0.1
3,506,234	-		Psest_3341	0.26	-0.2
3,506,235	+		Psest_3341	0.26	-1.1
3,506,235	+		Psest_3341	0.26	-1.0
3,506,235	+		Psest_3341	0.26	-0.2
3,506,236	-		Psest_3341	0.26	+1.4
3,506,236	-		Psest_3341	0.26	+0.1
3,506,258	+		Psest_3341	0.27	+0.3
3,506,259	-		Psest_3341	0.27	+0.2
3,506,259	-		Psest_3341	0.27	+0.4
3,506,292	+		Psest_3341	0.28	+0.6
3,506,292	+		Psest_3341	0.28	-2.0
3,506,293	-		Psest_3341	0.29	+0.8
3,506,293	-		Psest_3341	0.29	+0.8
3,506,314	+		Psest_3341	0.29	+0.1
3,506,314	+		Psest_3341	0.29	+0.4
3,506,314	+		Psest_3341	0.29	-0.2
3,506,315	-		Psest_3341	0.30	+2.7
3,506,339	+		Psest_3341	0.31	-0.2
3,506,458	-		Psest_3341	0.36	-1.2
3,506,458	-		Psest_3341	0.36	+2.0