Experiment: propionate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_0327 and Psest_0328 are separated by 95 nucleotides Psest_0328 and Psest_0329 are separated by 107 nucleotides
Psest_0327: Psest_0327 - Transcriptional regulator, at 349,860 to 350,798
_0327
Psest_0328: Psest_0328 - transketolase, bacterial and yeast, at 350,894 to 352,891
_0328
Psest_0329: Psest_0329 - erythrose-4-phosphate dehydrogenase, at 352,999 to 354,045
_0329
Position (kb) 350
351
352
353 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2 at 349.902 kb on + strand at 349.903 kb on - strand at 349.903 kb on - strand at 350.033 kb on - strand, within Psest_0327 at 350.139 kb on - strand, within Psest_0327 at 350.139 kb on - strand, within Psest_0327 at 350.178 kb on - strand, within Psest_0327 at 350.424 kb on - strand, within Psest_0327 at 350.424 kb on - strand, within Psest_0327 at 350.682 kb on + strand, within Psest_0327 at 350.682 kb on + strand, within Psest_0327 at 350.682 kb on + strand, within Psest_0327 at 350.683 kb on - strand, within Psest_0327 at 350.683 kb on - strand, within Psest_0327 at 350.683 kb on - strand, within Psest_0327 at 350.683 kb on - strand, within Psest_0327 at 350.683 kb on - strand, within Psest_0327 at 350.683 kb on - strand, within Psest_0327 at 350.683 kb on - strand, within Psest_0327 at 350.683 kb on - strand, within Psest_0327 at 350.683 kb on - strand, within Psest_0327 at 350.683 kb on - strand, within Psest_0327 at 350.683 kb on - strand, within Psest_0327 at 350.685 kb on + strand, within Psest_0327 at 350.685 kb on + strand, within Psest_0327 at 350.686 kb on - strand, within Psest_0327 at 350.686 kb on - strand, within Psest_0327 at 350.742 kb on + strand at 350.867 kb on + strand at 350.867 kb on + strand at 350.871 kb on + strand at 350.871 kb on + strand at 350.871 kb on + strand at 350.871 kb on + strand at 350.871 kb on + strand at 350.871 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction propionate (C) remove 349,902 + -0.8 349,903 - +0.2 349,903 - +1.8 350,033 - Psest_0327 0.18 +0.1 350,139 - Psest_0327 0.30 -1.2 350,139 - Psest_0327 0.30 +1.8 350,178 - Psest_0327 0.34 -1.9 350,424 - Psest_0327 0.60 -1.1 350,424 - Psest_0327 0.60 +0.4 350,682 + Psest_0327 0.88 -2.1 350,682 + Psest_0327 0.88 -1.5 350,682 + Psest_0327 0.88 -1.0 350,683 - Psest_0327 0.88 -2.4 350,683 - Psest_0327 0.88 -2.5 350,683 - Psest_0327 0.88 -1.4 350,683 - Psest_0327 0.88 -0.1 350,683 - Psest_0327 0.88 -2.4 350,683 - Psest_0327 0.88 +0.1 350,683 - Psest_0327 0.88 -0.4 350,683 - Psest_0327 0.88 -0.4 350,683 - Psest_0327 0.88 -2.3 350,683 - Psest_0327 0.88 -1.1 350,683 - Psest_0327 0.88 -2.0 350,685 + Psest_0327 0.88 -0.1 350,685 + Psest_0327 0.88 -2.6 350,686 - Psest_0327 0.88 -3.8 350,686 - Psest_0327 0.88 -4.7 350,742 + -1.5 350,867 + +2.6 350,867 + -0.1 350,871 + -0.0 350,871 + +2.0 350,871 + +2.1 350,871 + -1.3 350,871 + +1.0 350,871 + +2.6
Or see this region's nucleotide sequence