Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_1704

Experiment: propionate (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	propionate (C)
1,808,646	-		Psest_1702	0.57	+0.6
1,808,654	+		Psest_1702	0.58	-0.4
1,808,655	-		Psest_1702	0.58	-1.7
1,808,751	+		Psest_1702	0.74	+0.8
1,808,751	+		Psest_1702	0.74	+1.1
1,808,752	-		Psest_1702	0.74	-2.3
1,808,752	-		Psest_1702	0.74	+0.1
1,808,834	+		Psest_1702	0.87	-1.4
1,808,834	+		Psest_1702	0.87	+2.1
1,808,834	+		Psest_1702	0.87	-0.8
1,808,834	+		Psest_1702	0.87	+0.1
1,808,835	-		Psest_1702	0.87	+1.2
1,808,835	-		Psest_1702	0.87	-1.0
1,808,879	+				-0.8
1,808,879	+				-0.8
1,808,879	+				-0.2
1,808,879	+				+0.9
1,808,879	+				-0.3
1,808,879	+				+0.3
1,808,880	-				+0.1
1,808,973	+				-0.9
1,808,993	+				-1.1
1,808,994	-				-0.2
1,808,994	-				+0.3
1,809,039	-		Psest_1703	0.13	-1.0
1,809,044	+		Psest_1703	0.14	-0.1
1,809,044	+		Psest_1703	0.14	-0.8
1,809,044	+		Psest_1703	0.14	-0.4
1,809,044	+		Psest_1703	0.14	+0.3
1,809,044	+		Psest_1703	0.14	-1.8
1,809,044	+		Psest_1703	0.14	-0.6
1,809,044	+		Psest_1703	0.14	-0.6
1,809,045	-		Psest_1703	0.14	+0.1
1,809,103	+		Psest_1703	0.24	-0.3
1,809,107	-		Psest_1703	0.25	+0.7
1,809,181	+		Psest_1703	0.38	+1.8
1,809,181	+		Psest_1703	0.38	-0.9
1,809,181	+		Psest_1703	0.38	-0.4
1,809,181	+		Psest_1703	0.38	-1.5
1,809,182	-		Psest_1703	0.38	+0.4
1,809,294	+		Psest_1703	0.58	+0.6
1,809,379	+		Psest_1703	0.73	-1.0
1,809,379	+		Psest_1703	0.73	-0.7
1,809,380	-		Psest_1703	0.73	+0.1
1,809,380	-		Psest_1703	0.73	-3.0
1,809,430	+		Psest_1703	0.82	-1.5
1,809,430	+		Psest_1703	0.82	+1.1
1,809,430	+		Psest_1703	0.82	+1.7
1,809,430	+		Psest_1703	0.82	+1.6
1,809,430	+		Psest_1703	0.82	-1.6
1,809,431	-		Psest_1703	0.82	-1.5
1,809,431	-		Psest_1703	0.82	+3.0
1,809,431	-		Psest_1703	0.82	-0.1
1,809,431	-		Psest_1703	0.82	-0.4
1,809,431	-		Psest_1703	0.82	-0.7
1,809,529	+				-1.7
1,809,596	+				-0.3
1,809,596	+				+0.3
1,809,596	+				+1.1
1,809,596	+				-2.3
1,809,596	+				-3.1
1,809,596	+				+0.8
1,809,597	-				+0.1
1,809,597	-				+0.9
1,809,597	-				-0.9
1,809,597	-				+0.2
1,809,597	-				-0.2
1,809,597	-				+1.3
1,809,597	-				-0.6
1,809,597	-				-1.5
1,809,597	-				-0.4
1,809,597	-				+0.6
1,809,597	-				+0.6
1,809,597	-				+1.3
1,810,733	+		Psest_1704	0.69	+4.1
1,810,733	+		Psest_1704	0.69	+2.1
1,810,913	+		Psest_1704	0.80	+1.1
1,810,991	+		Psest_1704	0.84	+8.1
1,810,992	-		Psest_1704	0.84	+3.9
1,811,092	+				+6.1
1,811,107	+				+6.4
1,811,135	-				+5.6
1,811,135	-				+5.8
1,811,237	+				+1.1
1,811,238	-				+7.7
1,811,238	-				+2.7
1,811,281	+				+0.9
1,811,281	+				-0.6
1,811,281	+				-0.0
1,811,281	+				-0.3
1,811,281	+				+2.1
1,811,281	+				-1.3
1,811,281	+				+0.2
1,811,282	-				+0.7
1,811,282	-				+1.1
1,811,282	-				-0.8
1,811,283	+				+1.1
1,811,283	+				+0.9
1,811,283	+				+1.8
1,811,283	+				+1.7
1,811,283	+				-0.1
1,811,283	+				+0.1
1,811,283	+				-0.7
1,811,283	+				-0.2
1,811,283	+				-0.0
1,811,283	+				+1.1
1,811,283	+				+1.8
1,811,283	+				-1.3
1,811,283	+				+3.9
1,811,283	+				+0.9
1,811,283	+				+1.4
1,811,283	+				+2.9
1,811,283	+				+2.1
1,811,283	+				-0.2
1,811,283	+				+0.0
1,811,284	-				+1.1
1,811,284	-				-0.6
1,811,284	-				-0.4
1,811,284	-				+0.9
1,811,284	-				-0.2
1,811,284	-				-1.9
1,811,284	-				+0.2
1,811,284	-				-2.4
1,811,284	-				+3.4
1,811,284	-				-0.8
1,811,284	-				+1.1
1,811,284	-				-2.2
1,811,284	-				-1.7
1,811,284	-				-1.9
1,811,285	+				-0.8
1,811,285	+				+0.8
1,811,285	+				+0.3
1,811,285	+				+1.1
1,811,285	+				-0.7
1,811,285	+				+1.4
1,811,285	+				+1.2
1,811,285	+				+0.2
1,811,285	+				-0.2
1,811,285	+				+1.1
1,811,285	+				+0.8
1,811,285	+				+0.7
1,811,285	+				+0.4
1,811,285	+				-0.2
1,811,285	+				-1.1
1,811,285	+				-1.5
1,811,285	+				+0.4
1,811,286	-				+2.7
1,811,286	-				-0.0
1,811,286	-				-1.2
1,811,286	-				-2.9
1,811,286	-				-3.2
1,811,286	-				-0.0
1,811,286	-				-2.7
1,811,286	-				-1.4
1,811,286	-				-0.7
1,811,286	-				+1.3
1,811,286	-				-0.4
1,811,286	-				-0.5
1,811,286	-				+0.5
1,811,286	-				-1.7
1,811,286	-				-0.6
1,811,286	-				-0.8
1,811,286	-				-0.5
1,811,335	+				-1.6
1,811,335	+				+0.2
1,811,335	+				+0.2
1,811,335	+				-0.7
1,811,335	+				-0.3
1,811,335	+				+1.6
1,811,335	+				-0.2
1,811,335	+				-0.9
1,811,335	+				+0.4
1,811,336	-				+2.0
1,811,336	-				-0.4
1,811,336	-				-2.3
1,811,337	+				+0.7
1,811,337	+				+1.0
1,811,337	+				-1.0
1,811,337	+				+0.3
1,811,337	+				-0.0
1,811,337	+				-1.1
1,811,337	+				-1.1
1,811,337	+				+1.0
1,811,337	+				+0.4
1,811,337	+				-2.3
1,811,337	+				+0.7
1,811,337	+				+0.3
1,811,337	+				-1.9
1,811,337	+				-0.5
1,811,338	-				-0.6
1,811,338	-				+1.3
1,811,338	-				-0.4
1,811,338	-				+0.8
1,811,338	-				-1.4
1,811,338	-				-1.9
1,811,338	-				-0.7
1,811,338	-				+1.2
1,811,338	-				-1.0
1,811,338	-				-0.7
1,811,338	-				-1.0
1,811,338	-				+2.3
1,811,338	-				-1.6
1,811,339	+				-0.8
1,811,340	-				+0.9
1,811,340	-				+1.2
1,811,340	-				-1.5
1,811,340	-				+0.4
1,811,340	-				-0.1
1,811,340	-				-0.1
1,811,341	+				+3.0
1,811,342	-				+0.1
1,811,342	-				+0.0
1,811,342	-				+0.1
1,811,342	-				-0.1
1,811,363	-				-1.4
1,811,396	+				+1.4
1,811,397	-				-0.1
1,811,397	-				-0.5
1,811,397	-				+0.1
1,811,420	-				-0.3
1,811,431	+				+0.2
1,811,431	+				+0.3
1,811,431	+				-1.4
1,811,431	+				+0.7
1,811,432	-				-1.2
1,811,432	-				+0.1
1,811,432	-				+2.5
1,811,432	-				+0.3
1,811,554	+				-0.6
1,811,554	+				-0.7
1,811,554	+				-0.2