Experiment: Tween 20 (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_4308 and Psest_4309 overlap by 4 nucleotides Psest_4309 and Psest_4310 are separated by 12 nucleotides Psest_4310 and Psest_4311 overlap by 1 nucleotides Psest_4311 and Psest_4312 are separated by 44 nucleotides
Psest_4308: Psest_4308 - Fe2+/Zn2+ uptake regulation proteins, at 4,507,590 to 4,508,075
_4308
Psest_4309: Psest_4309 - ABC-type Mn/Zn transport systems, ATPase component, at 4,508,072 to 4,508,842
_4309
Psest_4310: Psest_4310 - ABC-type Mn2+/Zn2+ transport systems, permease components, at 4,508,855 to 4,509,640
_4310
Psest_4311: Psest_4311 - Predicted metal-dependent hydrolase, at 4,509,640 to 4,510,161
_4311
Psest_4312: Psest_4312 - anion transporter, at 4,510,206 to 4,511,693
_4312
Position (kb)
4508
4509
4510 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 4508.082 kb on + strand at 4508.082 kb on + strand at 4508.082 kb on + strand at 4508.552 kb on + strand, within Psest_4309 at 4508.753 kb on + strand, within Psest_4309 at 4508.754 kb on - strand, within Psest_4309 at 4508.754 kb on - strand, within Psest_4309 at 4508.754 kb on - strand, within Psest_4309 at 4508.754 kb on - strand, within Psest_4309 at 4508.754 kb on - strand, within Psest_4309 at 4508.754 kb on - strand, within Psest_4309 at 4508.754 kb on - strand, within Psest_4309 at 4508.754 kb on - strand, within Psest_4309 at 4508.840 kb on + strand at 4508.840 kb on + strand at 4508.841 kb on - strand at 4508.841 kb on - strand at 4508.951 kb on + strand, within Psest_4310 at 4508.952 kb on - strand, within Psest_4310 at 4509.194 kb on + strand, within Psest_4310 at 4509.655 kb on + strand at 4509.655 kb on + strand at 4509.655 kb on + strand at 4509.656 kb on - strand at 4509.656 kb on - strand at 4509.656 kb on - strand at 4509.727 kb on + strand, within Psest_4311 at 4509.782 kb on - strand, within Psest_4311 at 4509.787 kb on + strand, within Psest_4311 at 4509.787 kb on + strand, within Psest_4311 at 4509.787 kb on + strand, within Psest_4311 at 4509.812 kb on - strand, within Psest_4311 at 4509.812 kb on - strand, within Psest_4311 at 4509.847 kb on + strand, within Psest_4311 at 4509.847 kb on + strand, within Psest_4311 at 4509.847 kb on + strand, within Psest_4311 at 4509.847 kb on + strand, within Psest_4311 at 4509.848 kb on - strand, within Psest_4311 at 4509.848 kb on - strand, within Psest_4311 at 4509.848 kb on - strand, within Psest_4311 at 4509.848 kb on - strand, within Psest_4311 at 4510.045 kb on + strand, within Psest_4311 at 4510.045 kb on + strand, within Psest_4311 at 4510.045 kb on + strand, within Psest_4311 at 4510.045 kb on + strand, within Psest_4311 at 4510.045 kb on + strand, within Psest_4311 at 4510.045 kb on + strand, within Psest_4311 at 4510.046 kb on - strand, within Psest_4311 at 4510.046 kb on - strand, within Psest_4311 at 4510.046 kb on - strand, within Psest_4311 at 4510.046 kb on - strand, within Psest_4311 at 4510.190 kb on + strand at 4510.190 kb on + strand at 4510.190 kb on + strand at 4510.190 kb on + strand at 4510.191 kb on - strand at 4510.191 kb on - strand at 4510.372 kb on + strand, within Psest_4312 at 4510.621 kb on - strand, within Psest_4312
Per-strain Table
Position Strand Gene LocusTag Fraction Tween 20 (C) remove 4,508,082 + -0.4 4,508,082 + -0.1 4,508,082 + -0.4 4,508,552 + Psest_4309 0.62 -1.0 4,508,753 + Psest_4309 0.88 +0.5 4,508,754 - Psest_4309 0.88 -0.0 4,508,754 - Psest_4309 0.88 -1.1 4,508,754 - Psest_4309 0.88 +0.3 4,508,754 - Psest_4309 0.88 -3.0 4,508,754 - Psest_4309 0.88 -0.3 4,508,754 - Psest_4309 0.88 +0.1 4,508,754 - Psest_4309 0.88 +1.5 4,508,754 - Psest_4309 0.88 +1.0 4,508,840 + -2.3 4,508,840 + +1.0 4,508,841 - +0.6 4,508,841 - +1.4 4,508,951 + Psest_4310 0.12 -0.3 4,508,952 - Psest_4310 0.12 -1.3 4,509,194 + Psest_4310 0.43 -0.2 4,509,655 + +0.1 4,509,655 + +0.6 4,509,655 + -0.2 4,509,656 - +1.2 4,509,656 - +1.4 4,509,656 - +1.2 4,509,727 + Psest_4311 0.17 -0.3 4,509,782 - Psest_4311 0.27 +0.3 4,509,787 + Psest_4311 0.28 +0.9 4,509,787 + Psest_4311 0.28 -1.6 4,509,787 + Psest_4311 0.28 +0.2 4,509,812 - Psest_4311 0.33 -0.1 4,509,812 - Psest_4311 0.33 +1.0 4,509,847 + Psest_4311 0.40 -1.0 4,509,847 + Psest_4311 0.40 -1.9 4,509,847 + Psest_4311 0.40 +0.6 4,509,847 + Psest_4311 0.40 +1.3 4,509,848 - Psest_4311 0.40 +0.8 4,509,848 - Psest_4311 0.40 -0.1 4,509,848 - Psest_4311 0.40 +1.7 4,509,848 - Psest_4311 0.40 +0.9 4,510,045 + Psest_4311 0.78 -1.1 4,510,045 + Psest_4311 0.78 -1.5 4,510,045 + Psest_4311 0.78 +0.4 4,510,045 + Psest_4311 0.78 +0.4 4,510,045 + Psest_4311 0.78 -0.5 4,510,045 + Psest_4311 0.78 +1.3 4,510,046 - Psest_4311 0.78 +1.6 4,510,046 - Psest_4311 0.78 -0.5 4,510,046 - Psest_4311 0.78 +0.3 4,510,046 - Psest_4311 0.78 -0.4 4,510,190 + -1.6 4,510,190 + -2.6 4,510,190 + +0.9 4,510,190 + -1.1 4,510,191 - -0.3 4,510,191 - -0.0 4,510,372 + Psest_4312 0.11 +0.2 4,510,621 - Psest_4312 0.28 +0.0
Or see this region's nucleotide sequence