Experiment: Tween 20 (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_4190 and Psest_4191 are separated by 134 nucleotides Psest_4191 and Psest_4192 are separated by 4 nucleotides
Psest_4190: Psest_4190 - Nucleoside-diphosphate-sugar epimerases, at 4,367,749 to 4,368,609
_4190
Psest_4191: Psest_4191 - Transcriptional regulator, at 4,368,744 to 4,369,664
_4191
Psest_4192: Psest_4192 - ATP-dependent DNA helicase RecG, at 4,369,669 to 4,371,741
_4192
Position (kb)
4368
4369
4370 Strain fitness (log2 ratio)
-2
-1
0
1 at 4367.750 kb on + strand at 4367.750 kb on + strand at 4367.790 kb on - strand at 4367.960 kb on + strand, within Psest_4190 at 4367.960 kb on + strand, within Psest_4190 at 4367.960 kb on + strand, within Psest_4190 at 4367.961 kb on - strand, within Psest_4190 at 4367.961 kb on - strand, within Psest_4190 at 4367.961 kb on - strand, within Psest_4190 at 4368.050 kb on + strand, within Psest_4190 at 4368.050 kb on + strand, within Psest_4190 at 4368.155 kb on - strand, within Psest_4190 at 4368.263 kb on + strand, within Psest_4190 at 4368.331 kb on + strand, within Psest_4190 at 4368.331 kb on + strand, within Psest_4190 at 4368.331 kb on + strand, within Psest_4190 at 4368.331 kb on + strand, within Psest_4190 at 4368.331 kb on + strand, within Psest_4190 at 4368.332 kb on - strand, within Psest_4190 at 4368.332 kb on - strand, within Psest_4190 at 4368.332 kb on - strand, within Psest_4190 at 4368.332 kb on - strand, within Psest_4190 at 4368.332 kb on - strand, within Psest_4190 at 4368.332 kb on - strand, within Psest_4190 at 4368.332 kb on - strand, within Psest_4190 at 4368.353 kb on + strand, within Psest_4190 at 4368.353 kb on + strand, within Psest_4190 at 4368.353 kb on + strand, within Psest_4190 at 4368.353 kb on + strand, within Psest_4190 at 4368.353 kb on + strand, within Psest_4190 at 4368.353 kb on + strand, within Psest_4190 at 4368.354 kb on - strand, within Psest_4190 at 4368.354 kb on - strand, within Psest_4190 at 4368.354 kb on - strand, within Psest_4190 at 4368.354 kb on - strand, within Psest_4190 at 4368.354 kb on - strand, within Psest_4190 at 4368.354 kb on - strand, within Psest_4190 at 4368.401 kb on + strand, within Psest_4190 at 4368.401 kb on + strand, within Psest_4190 at 4368.402 kb on - strand, within Psest_4190 at 4368.402 kb on - strand, within Psest_4190 at 4368.402 kb on - strand, within Psest_4190 at 4368.402 kb on - strand, within Psest_4190 at 4368.402 kb on - strand, within Psest_4190 at 4368.402 kb on - strand, within Psest_4190 at 4368.411 kb on - strand, within Psest_4190 at 4368.411 kb on - strand, within Psest_4190 at 4368.411 kb on - strand, within Psest_4190 at 4368.518 kb on + strand, within Psest_4190 at 4368.518 kb on + strand, within Psest_4190 at 4368.519 kb on - strand, within Psest_4190 at 4368.589 kb on + strand at 4368.590 kb on - strand at 4368.590 kb on - strand at 4368.590 kb on - strand at 4368.621 kb on + strand at 4368.621 kb on + strand at 4368.622 kb on - strand at 4368.622 kb on - strand at 4368.646 kb on + strand at 4368.646 kb on + strand at 4368.646 kb on + strand at 4368.646 kb on + strand at 4368.646 kb on + strand at 4368.646 kb on + strand at 4368.712 kb on + strand at 4368.765 kb on + strand at 4368.765 kb on + strand at 4368.765 kb on + strand at 4369.039 kb on - strand, within Psest_4191 at 4369.039 kb on - strand, within Psest_4191 at 4369.053 kb on + strand, within Psest_4191 at 4369.053 kb on + strand, within Psest_4191 at 4369.053 kb on + strand, within Psest_4191 at 4369.054 kb on - strand, within Psest_4191 at 4369.054 kb on - strand, within Psest_4191 at 4369.054 kb on - strand, within Psest_4191 at 4369.054 kb on - strand, within Psest_4191 at 4369.054 kb on - strand, within Psest_4191 at 4369.054 kb on - strand, within Psest_4191 at 4369.110 kb on + strand, within Psest_4191 at 4369.239 kb on + strand, within Psest_4191 at 4370.047 kb on + strand, within Psest_4192 at 4370.047 kb on + strand, within Psest_4192
Per-strain Table
Position Strand Gene LocusTag Fraction Tween 20 (C) remove 4,367,750 + -0.9 4,367,750 + +0.6 4,367,790 - +0.9 4,367,960 + Psest_4190 0.25 -0.6 4,367,960 + Psest_4190 0.25 -0.7 4,367,960 + Psest_4190 0.25 -0.4 4,367,961 - Psest_4190 0.25 +0.6 4,367,961 - Psest_4190 0.25 -0.2 4,367,961 - Psest_4190 0.25 +0.1 4,368,050 + Psest_4190 0.35 +0.1 4,368,050 + Psest_4190 0.35 -0.3 4,368,155 - Psest_4190 0.47 -0.5 4,368,263 + Psest_4190 0.60 +0.3 4,368,331 + Psest_4190 0.68 +0.3 4,368,331 + Psest_4190 0.68 +0.7 4,368,331 + Psest_4190 0.68 +0.2 4,368,331 + Psest_4190 0.68 -0.5 4,368,331 + Psest_4190 0.68 +0.4 4,368,332 - Psest_4190 0.68 +0.2 4,368,332 - Psest_4190 0.68 +0.6 4,368,332 - Psest_4190 0.68 -0.2 4,368,332 - Psest_4190 0.68 +0.6 4,368,332 - Psest_4190 0.68 +0.1 4,368,332 - Psest_4190 0.68 -0.2 4,368,332 - Psest_4190 0.68 +0.3 4,368,353 + Psest_4190 0.70 -0.4 4,368,353 + Psest_4190 0.70 +0.1 4,368,353 + Psest_4190 0.70 +0.1 4,368,353 + Psest_4190 0.70 +0.3 4,368,353 + Psest_4190 0.70 +0.8 4,368,353 + Psest_4190 0.70 -0.2 4,368,354 - Psest_4190 0.70 -1.6 4,368,354 - Psest_4190 0.70 +1.4 4,368,354 - Psest_4190 0.70 -0.5 4,368,354 - Psest_4190 0.70 -0.2 4,368,354 - Psest_4190 0.70 +0.0 4,368,354 - Psest_4190 0.70 +0.2 4,368,401 + Psest_4190 0.76 +0.9 4,368,401 + Psest_4190 0.76 -0.1 4,368,402 - Psest_4190 0.76 -0.4 4,368,402 - Psest_4190 0.76 -0.4 4,368,402 - Psest_4190 0.76 -0.3 4,368,402 - Psest_4190 0.76 -1.1 4,368,402 - Psest_4190 0.76 -0.2 4,368,402 - Psest_4190 0.76 +0.3 4,368,411 - Psest_4190 0.77 -1.2 4,368,411 - Psest_4190 0.77 -0.5 4,368,411 - Psest_4190 0.77 +0.1 4,368,518 + Psest_4190 0.89 +0.6 4,368,518 + Psest_4190 0.89 -0.2 4,368,519 - Psest_4190 0.89 +0.3 4,368,589 + +0.2 4,368,590 - +0.4 4,368,590 - +0.4 4,368,590 - +0.6 4,368,621 + -0.5 4,368,621 + -0.1 4,368,622 - +0.9 4,368,622 - +0.5 4,368,646 + +0.1 4,368,646 + +1.0 4,368,646 + -0.4 4,368,646 + -1.3 4,368,646 + +1.0 4,368,646 + +0.4 4,368,712 + +0.3 4,368,765 + -0.7 4,368,765 + +1.0 4,368,765 + -0.5 4,369,039 - Psest_4191 0.32 -1.9 4,369,039 - Psest_4191 0.32 -1.6 4,369,053 + Psest_4191 0.34 +0.7 4,369,053 + Psest_4191 0.34 -0.0 4,369,053 + Psest_4191 0.34 +0.3 4,369,054 - Psest_4191 0.34 -1.2 4,369,054 - Psest_4191 0.34 -1.3 4,369,054 - Psest_4191 0.34 +0.3 4,369,054 - Psest_4191 0.34 -0.1 4,369,054 - Psest_4191 0.34 -0.4 4,369,054 - Psest_4191 0.34 -1.8 4,369,110 + Psest_4191 0.40 -2.2 4,369,239 + Psest_4191 0.54 -0.5 4,370,047 + Psest_4192 0.18 -0.3 4,370,047 + Psest_4192 0.18 +0.2
Or see this region's nucleotide sequence