Experiment: Tween 20 (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_2034 and Psest_2035 overlap by 4 nucleotides Psest_2035 and Psest_2036 are separated by 72 nucleotides
Psest_2034: Psest_2034 - ATPase related to the helicase subunit of the Holliday junction resolvase, at 2,155,159 to 2,156,484
_2034
Psest_2035: Psest_2035 - crcB protein, at 2,156,481 to 2,156,855
_2035
Psest_2036: Psest_2036 - seryl-tRNA synthetase, at 2,156,928 to 2,158,208
_2036
Position (kb)
2156
2157 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2155.537 kb on + strand, within Psest_2034 at 2155.630 kb on + strand, within Psest_2034 at 2155.630 kb on + strand, within Psest_2034 at 2155.630 kb on + strand, within Psest_2034 at 2155.631 kb on - strand, within Psest_2034 at 2155.631 kb on - strand, within Psest_2034 at 2155.904 kb on - strand, within Psest_2034 at 2155.934 kb on + strand, within Psest_2034 at 2156.006 kb on - strand, within Psest_2034 at 2156.006 kb on - strand, within Psest_2034 at 2156.006 kb on - strand, within Psest_2034 at 2156.024 kb on + strand, within Psest_2034 at 2156.024 kb on + strand, within Psest_2034 at 2156.024 kb on + strand, within Psest_2034 at 2156.024 kb on + strand, within Psest_2034 at 2156.024 kb on + strand, within Psest_2034 at 2156.025 kb on - strand, within Psest_2034 at 2156.025 kb on - strand, within Psest_2034 at 2156.025 kb on - strand, within Psest_2034 at 2156.153 kb on - strand, within Psest_2034 at 2156.186 kb on - strand, within Psest_2034 at 2156.186 kb on - strand, within Psest_2034 at 2156.241 kb on - strand, within Psest_2034 at 2156.308 kb on + strand, within Psest_2034 at 2156.350 kb on + strand, within Psest_2034 at 2156.350 kb on + strand, within Psest_2034 at 2156.465 kb on + strand at 2156.466 kb on - strand at 2156.466 kb on - strand at 2156.466 kb on - strand at 2156.583 kb on + strand, within Psest_2035 at 2156.584 kb on - strand, within Psest_2035 at 2156.584 kb on - strand, within Psest_2035 at 2156.637 kb on + strand, within Psest_2035 at 2156.637 kb on + strand, within Psest_2035 at 2156.787 kb on + strand, within Psest_2035 at 2156.874 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Tween 20 (C) remove 2,155,537 + Psest_2034 0.29 +0.1 2,155,630 + Psest_2034 0.36 +0.2 2,155,630 + Psest_2034 0.36 -0.4 2,155,630 + Psest_2034 0.36 +0.4 2,155,631 - Psest_2034 0.36 +0.1 2,155,631 - Psest_2034 0.36 -0.0 2,155,904 - Psest_2034 0.56 -0.4 2,155,934 + Psest_2034 0.58 +0.5 2,156,006 - Psest_2034 0.64 +0.3 2,156,006 - Psest_2034 0.64 +0.4 2,156,006 - Psest_2034 0.64 -2.7 2,156,024 + Psest_2034 0.65 +0.3 2,156,024 + Psest_2034 0.65 -0.3 2,156,024 + Psest_2034 0.65 -0.5 2,156,024 + Psest_2034 0.65 -0.1 2,156,024 + Psest_2034 0.65 -0.2 2,156,025 - Psest_2034 0.65 +1.0 2,156,025 - Psest_2034 0.65 +0.3 2,156,025 - Psest_2034 0.65 -0.4 2,156,153 - Psest_2034 0.75 +0.3 2,156,186 - Psest_2034 0.77 +2.0 2,156,186 - Psest_2034 0.77 -1.5 2,156,241 - Psest_2034 0.82 +0.4 2,156,308 + Psest_2034 0.87 +0.1 2,156,350 + Psest_2034 0.90 +0.3 2,156,350 + Psest_2034 0.90 +0.6 2,156,465 + -0.8 2,156,466 - -1.2 2,156,466 - +0.5 2,156,466 - -0.0 2,156,583 + Psest_2035 0.27 +0.4 2,156,584 - Psest_2035 0.27 -0.2 2,156,584 - Psest_2035 0.27 +0.1 2,156,637 + Psest_2035 0.42 +0.5 2,156,637 + Psest_2035 0.42 +0.2 2,156,787 + Psest_2035 0.82 -2.4 2,156,874 + -0.4
Or see this region's nucleotide sequence