Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_2941

Experiment: Ethanol (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ethanol (C)
3,137,420	+		Psest_2939	0.21	+0.5
3,137,420	+		Psest_2939	0.21	+0.7
3,137,420	+		Psest_2939	0.21	+0.7
3,137,420	+		Psest_2939	0.21	-1.1
3,137,421	-		Psest_2939	0.22	-0.3
3,137,421	-		Psest_2939	0.22	+0.2
3,137,421	-		Psest_2939	0.22	+0.7
3,137,421	-		Psest_2939	0.22	+0.8
3,137,421	-		Psest_2939	0.22	-0.6
3,137,421	-		Psest_2939	0.22	+0.2
3,137,556	-		Psest_2939	0.64	-1.1
3,137,556	-		Psest_2939	0.64	+1.1
3,137,636	+				+0.6
3,137,636	+				+0.2
3,137,636	+				+2.3
3,137,637	-				+0.0
3,137,637	-				+0.9
3,137,637	-				+0.4
3,137,637	-				+0.8
3,137,690	+				-1.1
3,137,720	+				+0.2
3,137,831	+				-1.0
3,137,837	+				-1.2
3,137,837	+				-0.3
3,137,838	-				+0.3
3,138,003	+		Psest_2940	0.25	-0.6
3,138,003	+		Psest_2940	0.25	+0.2
3,138,004	-		Psest_2940	0.26	-2.2
3,138,004	-		Psest_2940	0.26	-1.2
3,138,078	+		Psest_2940	0.59	-0.7
3,138,078	+		Psest_2940	0.59	-0.9
3,138,168	+				-1.4
3,138,168	+				-1.5
3,138,168	+				+0.2
3,138,168	+				-1.5
3,138,168	+				-1.0
3,138,168	+				+0.4
3,138,168	+				-0.8
3,138,169	-				-1.2
3,138,169	-				+0.0
3,138,169	-				+0.9
3,138,169	-				-0.9
3,138,340	+				-1.1
3,138,371	+				-1.1
3,138,371	+				+0.1
3,138,371	+				+0.3
3,138,371	+				+0.4
3,138,371	+				+0.2
3,138,371	+				+0.6
3,138,372	-				+0.3
3,138,372	-				+1.1
3,138,372	-				+1.0
3,138,372	-				+0.2
3,138,372	-				+0.4
3,138,372	-				+1.2
3,138,372	-				+0.3
3,138,372	-				+0.3
3,138,372	-				+1.9
3,138,372	-				+1.7
3,138,372	-				+0.6
3,138,372	-				+0.6
3,138,419	-				-0.5
3,138,441	+				-0.7
3,138,441	+				+1.0
3,138,442	-				-0.1
3,138,442	-				+1.2
3,138,442	-				+0.9
3,138,442	-				+1.3
3,138,442	-				+0.8
3,138,455	+				+0.9
3,138,557	+		Psest_2941	0.14	+1.1
3,138,735	-		Psest_2941	0.28	+1.0
3,138,895	-		Psest_2941	0.40	+1.2
3,139,022	+		Psest_2941	0.50	+1.0
3,139,022	+		Psest_2941	0.50	+0.2
3,139,022	+		Psest_2941	0.50	+1.2
3,139,023	-		Psest_2941	0.50	+0.8
3,139,094	+		Psest_2941	0.56	+0.6
3,139,095	-		Psest_2941	0.56	+1.3
3,139,095	-		Psest_2941	0.56	+1.0
3,139,095	-		Psest_2941	0.56	+0.5
3,139,095	-		Psest_2941	0.56	-0.1
3,139,095	-		Psest_2941	0.56	+0.7
3,139,095	-		Psest_2941	0.56	+0.7
3,139,095	-		Psest_2941	0.56	-1.4
3,139,124	+		Psest_2941	0.58	+1.3
3,139,143	-		Psest_2941	0.59	+0.3
3,139,143	-		Psest_2941	0.59	+1.3
3,139,143	-		Psest_2941	0.59	+0.6
3,139,169	+		Psest_2941	0.61	+1.4
3,139,170	-		Psest_2941	0.62	+0.3
3,139,170	-		Psest_2941	0.62	+0.2
3,139,170	-		Psest_2941	0.62	+0.9
3,139,379	+		Psest_2941	0.78	-0.4
3,139,379	+		Psest_2941	0.78	+1.1
3,139,379	+		Psest_2941	0.78	+0.1
3,139,379	+		Psest_2941	0.78	+0.5
3,139,379	+		Psest_2941	0.78	+0.0
3,139,380	-		Psest_2941	0.78	+0.4
3,139,380	-		Psest_2941	0.78	+0.8
3,139,380	-		Psest_2941	0.78	+0.5
3,139,380	-		Psest_2941	0.78	+0.8
3,139,418	+		Psest_2941	0.81	+0.5
3,139,418	+		Psest_2941	0.81	+1.8
3,139,419	-		Psest_2941	0.81	+0.3
3,139,419	-		Psest_2941	0.81	+2.2
3,139,419	-		Psest_2941	0.81	+0.6
3,139,463	+		Psest_2941	0.84	+0.8
3,139,478	+		Psest_2941	0.85	+0.1
3,139,478	+		Psest_2941	0.85	+1.4
3,139,478	+		Psest_2941	0.85	+1.8
3,139,479	-		Psest_2941	0.85	+1.1
3,139,642	+				+0.1
3,139,642	+				+0.5
3,139,642	+				+1.1
3,139,642	+				+2.0
3,139,642	+				-0.6
3,139,642	+				+1.3
3,139,642	+				+0.9
3,139,642	+				-0.1
3,139,642	+				+1.1
3,139,642	+				+0.5
3,139,642	+				+0.0
3,139,642	+				+0.9
3,139,642	+				-0.2
3,139,642	+				+1.2
3,139,642	+				+1.3
3,139,642	+				+1.5
3,139,642	+				+0.2
3,139,642	+				+1.1
3,139,643	-				+1.1
3,139,643	-				+1.1
3,139,643	-				+1.5
3,139,643	-				+0.4
3,139,643	-				+0.3
3,139,643	-				+1.3
3,139,643	-				+1.3
3,139,643	-				+1.0
3,139,643	-				+0.8
3,139,643	-				-0.6
3,139,643	-				+0.6
3,139,643	-				+0.7
3,139,643	-				+1.3
3,139,643	-				+0.9
3,139,643	-				+0.6
3,139,665	-				+1.9
3,139,827	+		Psest_2942	0.22	+2.9
3,139,828	-		Psest_2942	0.22	+0.3
3,139,828	-		Psest_2942	0.22	+1.2
3,139,860	+		Psest_2942	0.26	+1.6
3,139,861	-		Psest_2942	0.26	+0.7
3,139,861	-		Psest_2942	0.26	+0.5
3,139,861	-		Psest_2942	0.26	+1.2
3,139,861	-		Psest_2942	0.26	+1.3
3,139,861	-		Psest_2942	0.26	+0.8
3,139,861	-		Psest_2942	0.26	+1.4
3,139,861	-		Psest_2942	0.26	+0.9
3,139,920	+		Psest_2942	0.34	+1.5
3,139,921	-		Psest_2942	0.34	+0.9
3,139,921	-		Psest_2942	0.34	+1.3
3,139,921	-		Psest_2942	0.34	+2.5
3,139,921	-		Psest_2942	0.34	+1.6
3,140,145	+		Psest_2942	0.63	+1.0
3,140,385	+				-0.7
3,140,385	+				+2.4
3,140,385	+				+0.2
3,140,385	+				+1.2
3,140,386	-				+0.6
3,140,386	-				+0.7
3,140,389	+				+0.4
3,140,389	+				+1.3
3,140,389	+				+0.9
3,140,389	+				+0.4
3,140,389	+				+0.7
3,140,389	+				+0.6
3,140,389	+				+1.9
3,140,389	+				+1.5
3,140,389	+				+1.4
3,140,389	+				+0.3
3,140,389	+				+1.0
3,140,389	+				+1.2
3,140,389	+				+0.4
3,140,389	+				+0.9
3,140,389	+				+0.0
3,140,389	+				+1.0
3,140,389	+				+1.3
3,140,389	+				-0.8
3,140,389	+				-2.0
3,140,389	+				+0.7
3,140,389	+				+0.5
3,140,389	+				+0.4
3,140,389	+				+1.3
3,140,389	+				+0.0
3,140,389	+				+1.7
3,140,389	+				+0.5
3,140,389	+				+0.7
3,140,389	+				+1.1
3,140,389	+				+1.5
3,140,389	+				+1.4
3,140,389	+				-0.1
3,140,390	-				+2.0
3,140,390	-				-0.2
3,140,390	-				-0.4
3,140,390	-				+0.9
3,140,390	-				+0.6
3,140,390	-				+1.3
3,140,390	-				+0.5
3,140,390	-				+0.9
3,140,390	-				+2.0
3,140,390	-				+1.3
3,140,390	-				-0.4
3,140,390	-				-0.1
3,140,390	-				+0.0
3,140,390	-				+0.7
3,140,390	-				+0.6
3,140,390	-				+1.6
3,140,390	-				+0.3
3,140,390	-				-1.6
3,140,390	-				-1.0
3,140,390	-				-1.0
3,140,390	-				+0.8
3,140,390	-				+0.3
3,140,390	-				+1.1
3,140,390	-				-0.8
3,140,390	-				+1.9
3,140,391	+				+0.9
3,140,391	+				-0.3
3,140,391	+				+0.9
3,140,391	+				+1.2
3,140,391	+				+0.4
3,140,391	+				+1.3
3,140,391	+				+0.6
3,140,392	-				+0.8
3,140,392	-				+0.8
3,140,392	-				+2.1
3,140,392	-				+0.9
3,140,429	+				+0.0
3,140,448	-				-0.4
3,140,477	+				+0.0
3,140,477	+				-0.5
3,140,477	+				-0.1
3,140,477	+				-0.0
3,140,477	+				+1.0
3,140,478	-				-0.5
3,140,478	-				-0.0
3,140,478	-				+2.0
3,140,496	+				+0.9