Experiment: Ethanol (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_1660 and Psest_1661 are separated by 1 nucleotides Psest_1661 and Psest_1662 overlap by 4 nucleotides Psest_1662 and Psest_1663 are separated by 146 nucleotides
Psest_1660: Psest_1660 - NADH:ubiquinone oxidoreductase, Na(+)-translocating, F subunit, at 1,769,506 to 1,770,729
_1660
Psest_1661: Psest_1661 - Membrane-associated lipoprotein involved in thiamine biosynthesis, at 1,770,731 to 1,771,783
_1661
Psest_1662: Psest_1662 - Uncharacterized protein conserved in bacteria, at 1,771,780 to 1,772,007
_1662
Psest_1663: Psest_1663 - Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes, at 1,772,154 to 1,773,548
_1663
Position (kb)
1770
1771
1772 Strain fitness (log2 ratio)
-1
0
1
2
3 at 1770.064 kb on + strand, within Psest_1660 at 1770.100 kb on + strand, within Psest_1660 at 1770.244 kb on + strand, within Psest_1660 at 1770.457 kb on + strand, within Psest_1660 at 1770.469 kb on + strand, within Psest_1660 at 1770.469 kb on + strand, within Psest_1660 at 1770.589 kb on + strand, within Psest_1660 at 1770.628 kb on + strand at 1770.628 kb on + strand at 1770.628 kb on + strand at 1770.770 kb on + strand at 1770.770 kb on + strand at 1770.872 kb on + strand, within Psest_1661 at 1770.872 kb on + strand, within Psest_1661 at 1770.872 kb on + strand, within Psest_1661 at 1770.884 kb on + strand, within Psest_1661 at 1770.884 kb on + strand, within Psest_1661 at 1770.884 kb on + strand, within Psest_1661 at 1770.884 kb on + strand, within Psest_1661 at 1770.884 kb on + strand, within Psest_1661 at 1770.884 kb on + strand, within Psest_1661 at 1770.884 kb on + strand, within Psest_1661 at 1771.647 kb on + strand, within Psest_1661 at 1772.127 kb on + strand at 1772.151 kb on + strand at 1772.151 kb on + strand at 1772.151 kb on + strand at 1772.151 kb on + strand at 1772.151 kb on + strand at 1772.152 kb on - strand at 1772.164 kb on - strand at 1772.164 kb on - strand at 1772.637 kb on - strand, within Psest_1663 at 1772.641 kb on - strand, within Psest_1663
Per-strain Table
Position Strand Gene LocusTag Fraction Ethanol (C) remove 1,770,064 + Psest_1660 0.46 +1.4 1,770,100 + Psest_1660 0.49 +0.3 1,770,244 + Psest_1660 0.60 +1.7 1,770,457 + Psest_1660 0.78 -0.5 1,770,469 + Psest_1660 0.79 -0.3 1,770,469 + Psest_1660 0.79 +2.2 1,770,589 + Psest_1660 0.88 +1.7 1,770,628 + +0.1 1,770,628 + +0.5 1,770,628 + +0.8 1,770,770 + -0.2 1,770,770 + +1.0 1,770,872 + Psest_1661 0.13 +0.3 1,770,872 + Psest_1661 0.13 +0.7 1,770,872 + Psest_1661 0.13 +2.7 1,770,884 + Psest_1661 0.15 +2.9 1,770,884 + Psest_1661 0.15 +0.1 1,770,884 + Psest_1661 0.15 +1.7 1,770,884 + Psest_1661 0.15 +1.1 1,770,884 + Psest_1661 0.15 +1.7 1,770,884 + Psest_1661 0.15 +2.7 1,770,884 + Psest_1661 0.15 +2.8 1,771,647 + Psest_1661 0.87 +1.3 1,772,127 + +0.6 1,772,151 + -0.7 1,772,151 + +0.3 1,772,151 + +1.1 1,772,151 + +2.7 1,772,151 + +1.5 1,772,152 - +0.2 1,772,164 - +0.8 1,772,164 - +0.9 1,772,637 - Psest_1663 0.35 +0.3 1,772,641 - Psest_1663 0.35 -0.7
Or see this region's nucleotide sequence