Experiment: Ethanol (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_1657 and Psest_1658 are separated by 2 nucleotides Psest_1658 and Psest_1659 overlap by 1 nucleotides Psest_1659 and Psest_1660 are separated by 15 nucleotides
Psest_1657: Psest_1657 - NADH:ubiquinone oxidoreductase, Na(+)-translocating, C subunit, at 1,767,417 to 1,768,211
_1657
Psest_1658: Psest_1658 - NADH:ubiquinone oxidoreductase, Na(+)-translocating, D subunit, at 1,768,214 to 1,768,882
_1658
Psest_1659: Psest_1659 - NADH:ubiquinone oxidoreductase, Na(+)-translocating, E subunit, at 1,768,882 to 1,769,490
_1659
Psest_1660: Psest_1660 - NADH:ubiquinone oxidoreductase, Na(+)-translocating, F subunit, at 1,769,506 to 1,770,729
_1660
Position (kb)
1768
1769
1770 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 1768.187 kb on + strand at 1768.487 kb on + strand, within Psest_1658 at 1768.716 kb on + strand, within Psest_1658 at 1768.891 kb on + strand at 1769.059 kb on + strand, within Psest_1659 at 1769.060 kb on - strand, within Psest_1659 at 1769.065 kb on + strand, within Psest_1659 at 1769.140 kb on + strand, within Psest_1659 at 1769.140 kb on + strand, within Psest_1659 at 1769.194 kb on + strand, within Psest_1659 at 1769.209 kb on + strand, within Psest_1659 at 1769.293 kb on + strand, within Psest_1659 at 1769.317 kb on + strand, within Psest_1659 at 1769.389 kb on + strand, within Psest_1659 at 1769.389 kb on + strand, within Psest_1659 at 1769.389 kb on + strand, within Psest_1659 at 1769.389 kb on + strand, within Psest_1659 at 1769.389 kb on + strand, within Psest_1659 at 1769.480 kb on + strand at 1769.488 kb on + strand at 1770.064 kb on + strand, within Psest_1660 at 1770.100 kb on + strand, within Psest_1660 at 1770.244 kb on + strand, within Psest_1660 at 1770.457 kb on + strand, within Psest_1660 at 1770.469 kb on + strand, within Psest_1660 at 1770.469 kb on + strand, within Psest_1660
Per-strain Table
Position Strand Gene LocusTag Fraction Ethanol (C) remove 1,768,187 + -0.9 1,768,487 + Psest_1658 0.41 -0.7 1,768,716 + Psest_1658 0.75 +2.4 1,768,891 + +0.7 1,769,059 + Psest_1659 0.29 +2.4 1,769,060 - Psest_1659 0.29 +0.1 1,769,065 + Psest_1659 0.30 -0.3 1,769,140 + Psest_1659 0.42 +3.3 1,769,140 + Psest_1659 0.42 -2.0 1,769,194 + Psest_1659 0.51 +0.3 1,769,209 + Psest_1659 0.54 -1.5 1,769,293 + Psest_1659 0.67 +2.5 1,769,317 + Psest_1659 0.71 +0.9 1,769,389 + Psest_1659 0.83 +2.4 1,769,389 + Psest_1659 0.83 +2.7 1,769,389 + Psest_1659 0.83 +1.4 1,769,389 + Psest_1659 0.83 +1.1 1,769,389 + Psest_1659 0.83 +1.9 1,769,480 + +0.9 1,769,488 + +1.7 1,770,064 + Psest_1660 0.46 +1.4 1,770,100 + Psest_1660 0.49 +0.3 1,770,244 + Psest_1660 0.60 +1.7 1,770,457 + Psest_1660 0.78 -0.5 1,770,469 + Psest_1660 0.79 -0.3 1,770,469 + Psest_1660 0.79 +2.2
Or see this region's nucleotide sequence