Experiment: succinate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_0721 and Psest_0722 are separated by 91 nucleotides Psest_0722 and Psest_0723 are separated by 153 nucleotides
Psest_0721: Psest_0721 - tryptophanyl-tRNA synthetase, at 789,941 to 791,299
_0721
Psest_0722: Psest_0722 - Predicted ATPase, at 791,391 to 792,563
_0722
Psest_0723: Psest_0723 - Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain, at 792,717 to 793,706
_0723
Position (kb) 791
792
793 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2 at 791.405 kb on + strand at 791.565 kb on + strand, within Psest_0722 at 791.565 kb on + strand, within Psest_0722 at 791.655 kb on + strand, within Psest_0722 at 791.655 kb on + strand, within Psest_0722 at 791.655 kb on + strand, within Psest_0722 at 791.655 kb on + strand, within Psest_0722 at 791.655 kb on + strand, within Psest_0722 at 791.655 kb on + strand, within Psest_0722 at 791.655 kb on + strand, within Psest_0722 at 791.655 kb on + strand, within Psest_0722 at 791.655 kb on + strand, within Psest_0722 at 791.656 kb on - strand, within Psest_0722 at 791.656 kb on - strand, within Psest_0722 at 791.656 kb on - strand, within Psest_0722 at 791.656 kb on - strand, within Psest_0722 at 791.656 kb on - strand, within Psest_0722 at 791.688 kb on + strand, within Psest_0722 at 791.700 kb on - strand, within Psest_0722 at 791.976 kb on + strand, within Psest_0722 at 791.976 kb on + strand, within Psest_0722 at 791.977 kb on - strand, within Psest_0722 at 791.977 kb on - strand, within Psest_0722 at 792.300 kb on + strand, within Psest_0722 at 792.300 kb on + strand, within Psest_0722 at 792.300 kb on + strand, within Psest_0722 at 792.300 kb on + strand, within Psest_0722 at 792.300 kb on + strand, within Psest_0722 at 792.301 kb on - strand, within Psest_0722 at 792.301 kb on - strand, within Psest_0722 at 792.301 kb on - strand, within Psest_0722 at 792.301 kb on - strand, within Psest_0722 at 792.301 kb on - strand, within Psest_0722 at 792.301 kb on - strand, within Psest_0722 at 792.301 kb on - strand, within Psest_0722 at 792.301 kb on - strand, within Psest_0722 at 792.412 kb on - strand, within Psest_0722 at 792.465 kb on + strand at 792.465 kb on + strand at 792.465 kb on + strand at 792.465 kb on + strand at 792.466 kb on - strand at 792.466 kb on - strand at 792.538 kb on - strand at 792.650 kb on - strand at 792.719 kb on - strand at 792.733 kb on + strand at 792.820 kb on + strand, within Psest_0723 at 792.820 kb on + strand, within Psest_0723 at 792.820 kb on + strand, within Psest_0723 at 792.820 kb on + strand, within Psest_0723 at 792.821 kb on - strand, within Psest_0723 at 792.821 kb on - strand, within Psest_0723 at 792.891 kb on + strand, within Psest_0723 at 792.891 kb on + strand, within Psest_0723 at 792.891 kb on + strand, within Psest_0723 at 792.892 kb on - strand, within Psest_0723 at 792.892 kb on - strand, within Psest_0723 at 792.892 kb on - strand, within Psest_0723 at 792.892 kb on - strand, within Psest_0723 at 792.892 kb on - strand, within Psest_0723 at 792.892 kb on - strand, within Psest_0723 at 792.896 kb on - strand, within Psest_0723 at 792.896 kb on - strand, within Psest_0723 at 792.896 kb on - strand, within Psest_0723 at 793.088 kb on - strand, within Psest_0723 at 793.165 kb on + strand, within Psest_0723 at 793.165 kb on + strand, within Psest_0723 at 793.165 kb on + strand, within Psest_0723 at 793.165 kb on + strand, within Psest_0723 at 793.166 kb on - strand, within Psest_0723 at 793.166 kb on - strand, within Psest_0723 at 793.166 kb on - strand, within Psest_0723 at 793.166 kb on - strand, within Psest_0723 at 793.166 kb on - strand, within Psest_0723 at 793.171 kb on + strand, within Psest_0723 at 793.171 kb on + strand, within Psest_0723 at 793.171 kb on + strand, within Psest_0723 at 793.171 kb on + strand, within Psest_0723 at 793.171 kb on + strand, within Psest_0723 at 793.171 kb on + strand, within Psest_0723 at 793.171 kb on + strand, within Psest_0723 at 793.171 kb on + strand, within Psest_0723 at 793.171 kb on + strand, within Psest_0723 at 793.171 kb on + strand, within Psest_0723 at 793.171 kb on + strand, within Psest_0723 at 793.171 kb on + strand, within Psest_0723 at 793.171 kb on + strand, within Psest_0723 at 793.171 kb on + strand, within Psest_0723 at 793.171 kb on + strand, within Psest_0723 at 793.171 kb on + strand, within Psest_0723 at 793.171 kb on + strand, within Psest_0723 at 793.171 kb on + strand, within Psest_0723 at 793.172 kb on - strand, within Psest_0723 at 793.172 kb on - strand, within Psest_0723 at 793.172 kb on - strand, within Psest_0723 at 793.172 kb on - strand, within Psest_0723 at 793.172 kb on - strand, within Psest_0723 at 793.172 kb on - strand, within Psest_0723 at 793.208 kb on - strand, within Psest_0723
Per-strain Table
Position Strand Gene LocusTag Fraction succinate (C) remove 791,405 + +1.4 791,565 + Psest_0722 0.15 -3.6 791,565 + Psest_0722 0.15 -2.3 791,655 + Psest_0722 0.23 +0.6 791,655 + Psest_0722 0.23 -4.4 791,655 + Psest_0722 0.23 -3.0 791,655 + Psest_0722 0.23 -4.0 791,655 + Psest_0722 0.23 -2.7 791,655 + Psest_0722 0.23 -2.3 791,655 + Psest_0722 0.23 -1.6 791,655 + Psest_0722 0.23 -1.2 791,655 + Psest_0722 0.23 -0.7 791,656 - Psest_0722 0.23 -1.9 791,656 - Psest_0722 0.23 -2.7 791,656 - Psest_0722 0.23 -3.0 791,656 - Psest_0722 0.23 -1.6 791,656 - Psest_0722 0.23 -1.4 791,688 + Psest_0722 0.25 -1.2 791,700 - Psest_0722 0.26 -0.7 791,976 + Psest_0722 0.50 -1.4 791,976 + Psest_0722 0.50 -2.2 791,977 - Psest_0722 0.50 -2.0 791,977 - Psest_0722 0.50 -2.4 792,300 + Psest_0722 0.77 -1.0 792,300 + Psest_0722 0.77 -0.7 792,300 + Psest_0722 0.77 -0.7 792,300 + Psest_0722 0.77 -1.2 792,300 + Psest_0722 0.77 -2.0 792,301 - Psest_0722 0.78 -2.0 792,301 - Psest_0722 0.78 +0.0 792,301 - Psest_0722 0.78 +0.6 792,301 - Psest_0722 0.78 -3.2 792,301 - Psest_0722 0.78 -4.0 792,301 - Psest_0722 0.78 -1.9 792,301 - Psest_0722 0.78 -0.7 792,301 - Psest_0722 0.78 -1.0 792,412 - Psest_0722 0.87 -2.2 792,465 + -2.2 792,465 + -2.0 792,465 + -2.1 792,465 + -2.3 792,466 - -1.0 792,466 - +0.6 792,538 - -4.4 792,650 - -0.7 792,719 - +0.4 792,733 + +0.0 792,820 + Psest_0723 0.10 +1.8 792,820 + Psest_0723 0.10 -0.1 792,820 + Psest_0723 0.10 -0.5 792,820 + Psest_0723 0.10 +0.3 792,821 - Psest_0723 0.11 +0.5 792,821 - Psest_0723 0.11 +0.4 792,891 + Psest_0723 0.18 -1.4 792,891 + Psest_0723 0.18 +0.4 792,891 + Psest_0723 0.18 +0.2 792,892 - Psest_0723 0.18 +0.5 792,892 - Psest_0723 0.18 +0.2 792,892 - Psest_0723 0.18 -0.7 792,892 - Psest_0723 0.18 +0.6 792,892 - Psest_0723 0.18 -0.3 792,892 - Psest_0723 0.18 +0.4 792,896 - Psest_0723 0.18 -0.1 792,896 - Psest_0723 0.18 -1.6 792,896 - Psest_0723 0.18 -0.3 793,088 - Psest_0723 0.37 -0.7 793,165 + Psest_0723 0.45 +0.3 793,165 + Psest_0723 0.45 +0.0 793,165 + Psest_0723 0.45 -0.1 793,165 + Psest_0723 0.45 -0.5 793,166 - Psest_0723 0.45 -1.8 793,166 - Psest_0723 0.45 -1.6 793,166 - Psest_0723 0.45 +2.2 793,166 - Psest_0723 0.45 -0.4 793,166 - Psest_0723 0.45 +0.8 793,171 + Psest_0723 0.46 -1.3 793,171 + Psest_0723 0.46 +0.7 793,171 + Psest_0723 0.46 +0.5 793,171 + Psest_0723 0.46 +0.7 793,171 + Psest_0723 0.46 +0.5 793,171 + Psest_0723 0.46 +0.1 793,171 + Psest_0723 0.46 -0.5 793,171 + Psest_0723 0.46 +2.2 793,171 + Psest_0723 0.46 -0.0 793,171 + Psest_0723 0.46 -0.3 793,171 + Psest_0723 0.46 -0.8 793,171 + Psest_0723 0.46 -0.1 793,171 + Psest_0723 0.46 +0.3 793,171 + Psest_0723 0.46 +0.7 793,171 + Psest_0723 0.46 +0.7 793,171 + Psest_0723 0.46 -1.6 793,171 + Psest_0723 0.46 -0.2 793,171 + Psest_0723 0.46 -0.3 793,172 - Psest_0723 0.46 +0.0 793,172 - Psest_0723 0.46 -0.1 793,172 - Psest_0723 0.46 -0.2 793,172 - Psest_0723 0.46 +1.1 793,172 - Psest_0723 0.46 +0.2 793,172 - Psest_0723 0.46 +0.4 793,208 - Psest_0723 0.50 +0.2
Or see this region's nucleotide sequence