Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_3848

Experiment: succinate (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	succinate (C)
4,019,234	+		Psest_3847	0.43	-1.0
4,019,234	+		Psest_3847	0.43	-0.3
4,019,235	-		Psest_3847	0.43	-0.1
4,019,235	-		Psest_3847	0.43	-0.1
4,019,435	+		Psest_3847	0.58	-0.6
4,019,435	+		Psest_3847	0.58	+0.5
4,019,435	+		Psest_3847	0.58	-0.1
4,019,435	+		Psest_3847	0.58	-0.4
4,019,436	-		Psest_3847	0.58	+0.1
4,019,436	-		Psest_3847	0.58	-0.2
4,019,436	-		Psest_3847	0.58	+0.5
4,019,436	-		Psest_3847	0.58	+0.2
4,019,436	-		Psest_3847	0.58	+0.3
4,019,453	+		Psest_3847	0.59	-0.1
4,019,474	+		Psest_3847	0.61	-1.1
4,019,474	+		Psest_3847	0.61	-0.0
4,019,474	+		Psest_3847	0.61	-0.5
4,019,474	+		Psest_3847	0.61	-0.3
4,019,475	-		Psest_3847	0.61	-0.8
4,019,475	-		Psest_3847	0.61	+0.0
4,019,719	+		Psest_3847	0.79	-0.4
4,019,719	+		Psest_3847	0.79	+0.4
4,019,720	-		Psest_3847	0.79	-0.0
4,019,762	+		Psest_3847	0.82	-0.4
4,019,763	-		Psest_3847	0.82	-0.2
4,019,873	+				+0.1
4,019,874	-				-0.9
4,019,874	-				+0.6
4,020,010	-				-0.2
4,020,029	-				+0.1
4,020,044	+				-0.1
4,020,105	-				-0.3
4,020,114	+				+0.2
4,020,114	+				+0.8
4,020,115	-				+0.4
4,020,115	-				+0.3
4,020,115	-				-0.1
4,020,115	-				+0.1
4,020,115	-				-0.5
4,020,115	-				+1.3
4,020,317	+		Psest_3848	0.17	+0.7
4,020,318	-		Psest_3848	0.17	+1.0
4,020,318	-		Psest_3848	0.17	+0.1
4,020,318	-		Psest_3848	0.17	+0.2
4,020,318	-		Psest_3848	0.17	+0.3
4,020,374	+		Psest_3848	0.24	+0.4
4,020,374	+		Psest_3848	0.24	+0.7
4,020,375	-		Psest_3848	0.24	+0.2
4,020,375	-		Psest_3848	0.24	-0.2
4,020,375	-		Psest_3848	0.24	-1.1
4,020,377	+		Psest_3848	0.24	+0.3
4,020,377	+		Psest_3848	0.24	+0.1
4,020,377	+		Psest_3848	0.24	+0.0
4,020,377	+		Psest_3848	0.24	-0.1
4,020,377	+		Psest_3848	0.24	+0.7
4,020,377	+		Psest_3848	0.24	+0.4
4,020,377	+		Psest_3848	0.24	-0.1
4,020,378	-		Psest_3848	0.25	-1.6
4,020,378	-		Psest_3848	0.25	+3.5
4,020,378	-		Psest_3848	0.25	+1.0
4,020,378	-		Psest_3848	0.25	+0.3
4,020,378	-		Psest_3848	0.25	-0.3
4,020,378	-		Psest_3848	0.25	-1.8
4,020,378	-		Psest_3848	0.25	+0.9
4,020,378	-		Psest_3848	0.25	+0.4
4,020,378	-		Psest_3848	0.25	+0.4
4,020,419	+		Psest_3848	0.30	-0.3
4,020,420	-		Psest_3848	0.30	-2.0
4,020,467	+		Psest_3848	0.36	+0.8
4,020,467	+		Psest_3848	0.36	-0.0
4,020,467	+		Psest_3848	0.36	-0.4
4,020,467	+		Psest_3848	0.36	-1.4
4,020,467	+		Psest_3848	0.36	-0.2
4,020,467	+		Psest_3848	0.36	+1.6
4,020,467	+		Psest_3848	0.36	+1.2
4,020,467	+		Psest_3848	0.36	-0.4
4,020,467	+		Psest_3848	0.36	+0.5
4,020,467	+		Psest_3848	0.36	-0.1
4,020,467	+		Psest_3848	0.36	-0.2
4,020,467	+		Psest_3848	0.36	-0.3
4,020,467	+		Psest_3848	0.36	+0.3
4,020,467	+		Psest_3848	0.36	+0.4
4,020,468	-		Psest_3848	0.36	+0.9
4,020,468	-		Psest_3848	0.36	+0.7
4,020,468	-		Psest_3848	0.36	-0.1
4,020,468	-		Psest_3848	0.36	+2.1
4,020,468	-		Psest_3848	0.36	-0.5
4,020,468	-		Psest_3848	0.36	+0.9
4,020,468	-		Psest_3848	0.36	+1.2
4,020,468	-		Psest_3848	0.36	-0.5
4,020,468	-		Psest_3848	0.36	+0.6
4,020,468	-		Psest_3848	0.36	-0.5
4,020,468	-		Psest_3848	0.36	+1.0
4,020,468	-		Psest_3848	0.36	+1.1
4,020,468	-		Psest_3848	0.36	-1.3
4,020,468	-		Psest_3848	0.36	+0.5
4,020,468	-		Psest_3848	0.36	+0.3
4,020,468	-		Psest_3848	0.36	+0.2
4,020,468	-		Psest_3848	0.36	+0.2
4,020,527	+		Psest_3848	0.44	+0.5
4,020,527	+		Psest_3848	0.44	-0.6
4,020,527	+		Psest_3848	0.44	-0.3
4,020,527	+		Psest_3848	0.44	+2.5
4,020,527	+		Psest_3848	0.44	-0.8
4,020,527	+		Psest_3848	0.44	+0.9
4,020,527	+		Psest_3848	0.44	-0.3
4,020,527	+		Psest_3848	0.44	-0.7
4,020,527	+		Psest_3848	0.44	-0.1
4,020,527	+		Psest_3848	0.44	+0.3
4,020,527	+		Psest_3848	0.44	-1.1
4,020,527	+		Psest_3848	0.44	-1.3
4,020,527	+		Psest_3848	0.44	-0.7
4,020,527	+		Psest_3848	0.44	-0.2
4,020,527	+		Psest_3848	0.44	-0.6
4,020,528	-		Psest_3848	0.44	-0.6
4,020,528	-		Psest_3848	0.44	-0.6
4,020,528	-		Psest_3848	0.44	-0.5
4,020,528	-		Psest_3848	0.44	-3.1
4,020,528	-		Psest_3848	0.44	+0.7
4,020,528	-		Psest_3848	0.44	+1.4
4,020,528	-		Psest_3848	0.44	-1.3
4,020,528	-		Psest_3848	0.44	-0.4
4,020,528	-		Psest_3848	0.44	+0.1
4,020,528	-		Psest_3848	0.44	+0.1
4,020,528	-		Psest_3848	0.44	-0.4
4,020,528	-		Psest_3848	0.44	+0.5
4,020,528	-		Psest_3848	0.44	-1.8
4,020,528	-		Psest_3848	0.44	-0.3
4,020,656	+		Psest_3848	0.61	+0.5
4,020,656	+		Psest_3848	0.61	+0.5
4,020,662	+		Psest_3848	0.62	-0.2
4,020,662	+		Psest_3848	0.62	-0.3
4,020,662	+		Psest_3848	0.62	+0.7
4,020,662	+		Psest_3848	0.62	-1.6
4,020,662	+		Psest_3848	0.62	-0.3
4,020,662	+		Psest_3848	0.62	+0.3
4,020,662	+		Psest_3848	0.62	+0.2
4,020,662	+		Psest_3848	0.62	+0.7
4,020,663	-		Psest_3848	0.62	-1.3
4,020,677	+		Psest_3848	0.64	-0.1
4,020,677	+		Psest_3848	0.64	-0.2
4,020,677	+		Psest_3848	0.64	-0.9
4,020,684	+		Psest_3848	0.65	+0.1
4,020,848	+		Psest_3848	0.86	+0.1
4,020,848	+		Psest_3848	0.86	+0.7
4,020,849	-		Psest_3848	0.86	+0.7
4,020,849	-		Psest_3848	0.86	-2.5
4,020,851	+		Psest_3848	0.87	-0.7
4,020,851	+		Psest_3848	0.87	+0.6
4,020,851	+		Psest_3848	0.87	+2.2
4,020,851	+		Psest_3848	0.87	+0.2
4,020,851	+		Psest_3848	0.87	+0.1
4,020,851	+		Psest_3848	0.87	-0.1
4,020,851	+		Psest_3848	0.87	+0.4
4,020,851	+		Psest_3848	0.87	-0.3
4,020,851	+		Psest_3848	0.87	+1.4
4,020,852	-		Psest_3848	0.87	-2.0
4,020,852	-		Psest_3848	0.87	-0.2
4,020,852	-		Psest_3848	0.87	-0.8
4,020,852	-		Psest_3848	0.87	-0.2
4,020,852	-		Psest_3848	0.87	+0.8
4,020,852	-		Psest_3848	0.87	-0.3
4,020,942	+				+0.3
4,020,950	+				-0.5
4,020,950	+				+0.2
4,020,950	+				-0.4
4,020,950	+				-0.4
4,020,950	+				+1.0
4,020,950	+				+0.4
4,020,950	+				+0.6
4,020,951	-				+0.5
4,020,951	-				+0.5
4,021,005	+				+0.7
4,021,097	+		Psest_3849	0.10	+0.2
4,021,097	+		Psest_3849	0.10	+0.5
4,021,218	+		Psest_3849	0.24	-1.6
4,021,218	+		Psest_3849	0.24	-0.5
4,021,219	-		Psest_3849	0.24	+0.1
4,021,219	-		Psest_3849	0.24	+0.3
4,021,219	-		Psest_3849	0.24	+0.5
4,021,398	+		Psest_3849	0.44	-1.6
4,021,399	-		Psest_3849	0.44	+0.6
4,021,461	+		Psest_3849	0.51	-0.8
4,021,462	-		Psest_3849	0.51	+1.5
4,021,462	-		Psest_3849	0.51	-1.0
4,021,515	+		Psest_3849	0.57	-0.3
4,021,516	-		Psest_3849	0.57	+0.1
4,021,516	-		Psest_3849	0.57	-0.6
4,021,797	+		Psest_3849	0.88	-2.5
4,021,797	+		Psest_3849	0.88	-0.1
4,021,797	+		Psest_3849	0.88	-1.2
4,021,797	+		Psest_3849	0.88	+0.0
4,021,797	+		Psest_3849	0.88	-0.8
4,021,797	+		Psest_3849	0.88	+0.2
4,021,797	+		Psest_3849	0.88	-0.6
4,021,798	-		Psest_3849	0.89	+0.2
4,021,798	-		Psest_3849	0.89	-0.3
4,021,798	-		Psest_3849	0.89	-1.6
4,021,798	-		Psest_3849	0.89	-0.8
4,021,824	+				-0.2
4,021,824	+				-0.1
4,021,824	+				+0.4
4,021,824	+				-0.7
4,021,824	+				-0.6
4,021,825	-				+0.9
4,021,825	-				+0.7
4,021,825	-				-2.4
4,021,825	-				-0.5
4,021,825	-				+0.3
4,021,825	-				-2.3
4,021,825	-				-0.0
4,021,825	-				+0.5
4,021,825	-				+0.7
4,021,825	-				+0.4
4,021,830	+				+0.6
4,021,831	-				-0.4
4,021,831	-				-0.2
4,021,831	-				+0.7
4,021,831	-				+0.4
4,021,913	+				+0.0
4,021,914	-				-1.1
4,021,920	+				-0.2
4,021,920	+				-0.1
4,021,920	+				+0.3
4,021,922	+				+0.3
4,021,922	+				-0.4
4,021,922	+				+0.3
4,021,922	+				+0.5
4,021,922	+				+0.6
4,021,922	+				+0.7
4,021,922	+				-2.0
4,021,922	+				+1.2
4,021,922	+				+0.4
4,021,923	-				-0.7
4,021,923	-				-0.5
4,021,923	-				-1.0
4,021,923	-				-1.1
4,021,923	-				+0.7
4,021,923	-				+0.6
4,021,923	-				+1.0
4,021,923	-				-0.1
4,021,923	-				+0.0
4,021,942	+				-0.5
4,021,942	+				+0.1
4,021,942	+				+2.0
4,021,943	-				+0.1
4,021,943	-				+0.1
4,021,943	-				-0.3