Experiment: L-Lactate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_4400 and Psest_4401 overlap by 4 nucleotides Psest_4401 and Psest_4402 are separated by 72 nucleotides Psest_4402 and Psest_4403 are separated by 109 nucleotides Psest_4403 and Psest_4404 are separated by 969 nucleotides
Psest_4400: Psest_4400 - hypothetical protein, at 4,635 to 4,802
_4400
Psest_4401: Psest_4401 - hypothetical protein, at 4,799 to 5,005
_4401
Psest_4402: Psest_4402 - hypothetical protein, at 5,078 to 5,221
_4402
Psest_4403: Psest_4403 - hypothetical protein, at 5,331 to 5,651
_4403
Psest_4404: Psest_4404 - hypothetical protein, at 6,621 to 6,893
_4404
Position (kb) 5
6 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3
4
5 at 5.092 kb on + strand at 5.092 kb on + strand at 5.092 kb on + strand at 5.092 kb on + strand at 5.092 kb on + strand at 5.092 kb on + strand at 5.092 kb on + strand at 5.092 kb on + strand at 5.235 kb on + strand at 5.235 kb on + strand at 5.259 kb on + strand at 5.380 kb on + strand, within Psest_4403 at 5.380 kb on + strand, within Psest_4403 at 5.380 kb on + strand, within Psest_4403 at 5.380 kb on + strand, within Psest_4403 at 5.380 kb on + strand, within Psest_4403 at 5.380 kb on + strand, within Psest_4403 at 5.380 kb on + strand, within Psest_4403 at 5.383 kb on + strand, within Psest_4403 at 5.383 kb on + strand, within Psest_4403 at 5.383 kb on + strand, within Psest_4403 at 5.383 kb on + strand, within Psest_4403 at 5.383 kb on + strand, within Psest_4403 at 5.383 kb on + strand, within Psest_4403 at 5.383 kb on + strand, within Psest_4403 at 5.383 kb on + strand, within Psest_4403 at 5.383 kb on + strand, within Psest_4403 at 5.383 kb on + strand, within Psest_4403 at 5.383 kb on + strand, within Psest_4403 at 5.383 kb on + strand, within Psest_4403 at 5.383 kb on + strand, within Psest_4403 at 5.383 kb on + strand, within Psest_4403 at 5.383 kb on + strand, within Psest_4403 at 5.383 kb on + strand, within Psest_4403 at 5.383 kb on + strand, within Psest_4403 at 5.383 kb on + strand, within Psest_4403 at 5.383 kb on + strand, within Psest_4403 at 5.383 kb on + strand, within Psest_4403 at 5.383 kb on + strand, within Psest_4403 at 5.383 kb on + strand, within Psest_4403 at 5.383 kb on + strand, within Psest_4403 at 5.383 kb on + strand, within Psest_4403 at 5.383 kb on + strand, within Psest_4403 at 5.383 kb on + strand, within Psest_4403 at 5.383 kb on + strand, within Psest_4403 at 5.383 kb on + strand, within Psest_4403 at 5.457 kb on + strand, within Psest_4403 at 5.457 kb on + strand, within Psest_4403 at 5.572 kb on + strand, within Psest_4403 at 5.572 kb on + strand, within Psest_4403 at 5.572 kb on + strand, within Psest_4403 at 5.572 kb on + strand, within Psest_4403 at 5.572 kb on + strand, within Psest_4403 at 5.572 kb on + strand, within Psest_4403 at 5.572 kb on + strand, within Psest_4403 at 5.572 kb on + strand, within Psest_4403 at 5.572 kb on + strand, within Psest_4403 at 5.572 kb on + strand, within Psest_4403 at 5.572 kb on + strand, within Psest_4403 at 5.572 kb on + strand, within Psest_4403 at 5.572 kb on + strand, within Psest_4403 at 5.572 kb on + strand, within Psest_4403 at 5.572 kb on + strand, within Psest_4403 at 5.573 kb on - strand, within Psest_4403 at 5.649 kb on + strand at 5.649 kb on + strand at 5.649 kb on + strand at 5.649 kb on + strand at 5.649 kb on + strand at 5.649 kb on + strand at 5.649 kb on + strand at 5.694 kb on + strand at 5.694 kb on + strand at 5.694 kb on + strand at 5.694 kb on + strand at 5.694 kb on + strand at 5.694 kb on + strand at 5.694 kb on + strand at 5.694 kb on + strand at 5.694 kb on + strand at 5.694 kb on + strand at 5.694 kb on + strand at 5.694 kb on + strand at 5.790 kb on + strand at 5.790 kb on + strand at 5.790 kb on + strand at 5.790 kb on + strand at 5.790 kb on + strand at 5.843 kb on + strand at 5.850 kb on + strand at 5.850 kb on + strand at 5.850 kb on + strand at 5.850 kb on + strand at 5.850 kb on + strand at 5.900 kb on + strand at 5.900 kb on + strand at 5.900 kb on + strand at 5.900 kb on + strand at 5.900 kb on + strand at 5.900 kb on + strand at 5.900 kb on + strand at 5.900 kb on + strand at 5.900 kb on + strand at 5.900 kb on + strand at 5.900 kb on + strand at 5.900 kb on + strand at 5.900 kb on + strand at 5.998 kb on + strand at 5.998 kb on + strand at 5.998 kb on + strand at 5.998 kb on + strand at 5.998 kb on + strand at 5.998 kb on + strand at 5.998 kb on + strand at 5.998 kb on + strand at 5.998 kb on + strand at 5.998 kb on + strand at 5.998 kb on + strand at 5.998 kb on + strand at 5.998 kb on + strand at 5.998 kb on + strand at 5.998 kb on + strand at 5.999 kb on - strand at 5.999 kb on - strand at 6.040 kb on + strand at 6.040 kb on + strand at 6.040 kb on + strand at 6.040 kb on + strand at 6.040 kb on + strand at 6.041 kb on - strand at 6.081 kb on + strand at 6.081 kb on + strand at 6.081 kb on + strand at 6.081 kb on + strand at 6.108 kb on + strand at 6.108 kb on + strand at 6.240 kb on + strand at 6.240 kb on + strand at 6.331 kb on + strand at 6.349 kb on + strand at 6.349 kb on + strand at 6.349 kb on + strand at 6.349 kb on + strand at 6.350 kb on - strand at 6.356 kb on + strand at 6.356 kb on + strand at 6.356 kb on + strand at 6.356 kb on + strand at 6.447 kb on + strand at 6.447 kb on + strand at 6.447 kb on + strand at 6.447 kb on + strand at 6.447 kb on + strand at 6.498 kb on + strand at 6.498 kb on + strand at 6.498 kb on + strand at 6.498 kb on + strand at 6.509 kb on + strand at 6.509 kb on + strand at 6.509 kb on + strand at 6.509 kb on + strand at 6.509 kb on + strand at 6.509 kb on + strand at 6.509 kb on + strand at 6.509 kb on + strand at 6.509 kb on + strand at 6.509 kb on + strand at 6.509 kb on + strand at 6.510 kb on - strand at 6.510 kb on - strand at 6.522 kb on + strand at 6.584 kb on + strand at 6.638 kb on + strand at 6.638 kb on + strand at 6.638 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Lactate (C) remove 5,092 + +0.2 5,092 + +5.1 5,092 + +0.1 5,092 + +0.7 5,092 + +1.3 5,092 + +1.2 5,092 + +0.4 5,092 + +0.4 5,235 + -0.4 5,235 + +2.7 5,259 + +0.6 5,380 + Psest_4403 0.15 +0.5 5,380 + Psest_4403 0.15 +1.9 5,380 + Psest_4403 0.15 +1.0 5,380 + Psest_4403 0.15 -0.6 5,380 + Psest_4403 0.15 +0.3 5,380 + Psest_4403 0.15 -1.1 5,380 + Psest_4403 0.15 +0.8 5,383 + Psest_4403 0.16 +0.1 5,383 + Psest_4403 0.16 +0.1 5,383 + Psest_4403 0.16 +1.4 5,383 + Psest_4403 0.16 -0.2 5,383 + Psest_4403 0.16 +1.3 5,383 + Psest_4403 0.16 +0.7 5,383 + Psest_4403 0.16 +1.7 5,383 + Psest_4403 0.16 +0.2 5,383 + Psest_4403 0.16 +0.8 5,383 + Psest_4403 0.16 -0.1 5,383 + Psest_4403 0.16 +0.9 5,383 + Psest_4403 0.16 +0.6 5,383 + Psest_4403 0.16 -0.2 5,383 + Psest_4403 0.16 +1.9 5,383 + Psest_4403 0.16 +0.4 5,383 + Psest_4403 0.16 +2.0 5,383 + Psest_4403 0.16 -0.2 5,383 + Psest_4403 0.16 +2.5 5,383 + Psest_4403 0.16 +0.7 5,383 + Psest_4403 0.16 +0.9 5,383 + Psest_4403 0.16 -0.2 5,383 + Psest_4403 0.16 -0.5 5,383 + Psest_4403 0.16 +0.0 5,383 + Psest_4403 0.16 +0.1 5,383 + Psest_4403 0.16 +2.1 5,383 + Psest_4403 0.16 +1.0 5,383 + Psest_4403 0.16 +1.5 5,383 + Psest_4403 0.16 +2.0 5,457 + Psest_4403 0.39 -0.8 5,457 + Psest_4403 0.39 +0.5 5,572 + Psest_4403 0.75 +1.4 5,572 + Psest_4403 0.75 +1.1 5,572 + Psest_4403 0.75 +0.2 5,572 + Psest_4403 0.75 +0.5 5,572 + Psest_4403 0.75 -0.3 5,572 + Psest_4403 0.75 +1.5 5,572 + Psest_4403 0.75 -0.1 5,572 + Psest_4403 0.75 -1.5 5,572 + Psest_4403 0.75 +0.5 5,572 + Psest_4403 0.75 +1.5 5,572 + Psest_4403 0.75 +0.5 5,572 + Psest_4403 0.75 +1.1 5,572 + Psest_4403 0.75 +2.0 5,572 + Psest_4403 0.75 +0.6 5,572 + Psest_4403 0.75 -0.9 5,573 - Psest_4403 0.75 +0.7 5,649 + +2.5 5,649 + +0.5 5,649 + +0.8 5,649 + +0.4 5,649 + +1.2 5,649 + +0.4 5,649 + +0.7 5,694 + -0.2 5,694 + -0.8 5,694 + +1.1 5,694 + -0.1 5,694 + -3.4 5,694 + -1.7 5,694 + -0.3 5,694 + -0.5 5,694 + -1.1 5,694 + -0.5 5,694 + +0.2 5,694 + -0.1 5,790 + -0.4 5,790 + +0.5 5,790 + -1.5 5,790 + -1.6 5,790 + -1.2 5,843 + +4.3 5,850 + -0.2 5,850 + -0.4 5,850 + +1.0 5,850 + +0.7 5,850 + +0.4 5,900 + -0.6 5,900 + -0.1 5,900 + +1.7 5,900 + -1.0 5,900 + -0.6 5,900 + -0.7 5,900 + +1.1 5,900 + +0.3 5,900 + +0.6 5,900 + +0.1 5,900 + -0.2 5,900 + +1.1 5,900 + -0.8 5,998 + +2.0 5,998 + -0.7 5,998 + -0.2 5,998 + +0.6 5,998 + +1.2 5,998 + +1.1 5,998 + +1.4 5,998 + +0.1 5,998 + -0.7 5,998 + -0.5 5,998 + +1.1 5,998 + +0.2 5,998 + -1.1 5,998 + +0.1 5,998 + +0.2 5,999 - +1.3 5,999 - -1.0 6,040 + +0.0 6,040 + -0.3 6,040 + +1.7 6,040 + +0.2 6,040 + -0.3 6,041 - -0.8 6,081 + -0.5 6,081 + -0.6 6,081 + +0.7 6,081 + -1.2 6,108 + -1.8 6,108 + -1.3 6,240 + -2.5 6,240 + +2.3 6,331 + -2.2 6,349 + -1.6 6,349 + -0.9 6,349 + -0.6 6,349 + -1.5 6,350 - +2.0 6,356 + +0.8 6,356 + -0.2 6,356 + -1.1 6,356 + -0.1 6,447 + +0.1 6,447 + -1.4 6,447 + -0.3 6,447 + -0.2 6,447 + -2.9 6,498 + -2.0 6,498 + +1.5 6,498 + -1.5 6,498 + -2.3 6,509 + -0.5 6,509 + +0.1 6,509 + -0.8 6,509 + -1.2 6,509 + +0.5 6,509 + -0.6 6,509 + -0.3 6,509 + -1.9 6,509 + +1.1 6,509 + -0.6 6,509 + -1.7 6,510 - -0.5 6,510 - +0.4 6,522 + +1.7 6,584 + -0.3 6,638 + +0.3 6,638 + -1.1 6,638 + -0.9
Or see this region's nucleotide sequence