Experiment: L-Lactate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_2066 and Psest_2067 are separated by 2 nucleotides Psest_2067 and Psest_2068 overlap by 4 nucleotides
Psest_2066: Psest_2066 - ABC-type uncharacterized transport system, permease component, at 2,192,268 to 2,193,341
_2066
Psest_2067: Psest_2067 - ABC-type oligopeptide transport system, periplasmic component, at 2,193,344 to 2,195,230
_2067
Psest_2068: Psest_2068 - ABC-type oligopeptide transport system, periplasmic component, at 2,195,227 to 2,197,056
_2068
Position (kb)
2193
2194
2195
2196 Strain fitness (log2 ratio)
-1
0
1
2 at 2192.926 kb on + strand, within Psest_2066 at 2193.536 kb on - strand, within Psest_2067 at 2194.305 kb on + strand, within Psest_2067 at 2194.753 kb on - strand, within Psest_2067 at 2194.880 kb on - strand, within Psest_2067 at 2195.277 kb on + strand at 2195.278 kb on - strand at 2195.280 kb on - strand at 2195.520 kb on - strand, within Psest_2068 at 2195.520 kb on - strand, within Psest_2068 at 2195.586 kb on - strand, within Psest_2068 at 2195.606 kb on + strand, within Psest_2068 at 2195.606 kb on + strand, within Psest_2068 at 2195.957 kb on + strand, within Psest_2068 at 2195.958 kb on - strand, within Psest_2068 at 2195.958 kb on - strand, within Psest_2068 at 2195.958 kb on - strand, within Psest_2068 at 2195.958 kb on - strand, within Psest_2068 at 2195.958 kb on - strand, within Psest_2068 at 2195.984 kb on + strand, within Psest_2068 at 2195.985 kb on - strand, within Psest_2068 at 2195.985 kb on - strand, within Psest_2068 at 2195.985 kb on - strand, within Psest_2068 at 2195.985 kb on - strand, within Psest_2068 at 2195.985 kb on - strand, within Psest_2068 at 2196.198 kb on - strand, within Psest_2068 at 2196.198 kb on - strand, within Psest_2068 at 2196.198 kb on - strand, within Psest_2068 at 2196.198 kb on - strand, within Psest_2068 at 2196.198 kb on - strand, within Psest_2068
Per-strain Table
Position Strand Gene LocusTag Fraction L-Lactate (C) remove 2,192,926 + Psest_2066 0.61 +1.4 2,193,536 - Psest_2067 0.10 +1.0 2,194,305 + Psest_2067 0.51 -0.2 2,194,753 - Psest_2067 0.75 +2.3 2,194,880 - Psest_2067 0.81 -1.3 2,195,277 + +1.0 2,195,278 - +0.5 2,195,280 - -0.0 2,195,520 - Psest_2068 0.16 +0.7 2,195,520 - Psest_2068 0.16 -1.5 2,195,586 - Psest_2068 0.20 +0.6 2,195,606 + Psest_2068 0.21 +0.5 2,195,606 + Psest_2068 0.21 -0.0 2,195,957 + Psest_2068 0.40 +0.9 2,195,958 - Psest_2068 0.40 -0.1 2,195,958 - Psest_2068 0.40 +0.5 2,195,958 - Psest_2068 0.40 +0.4 2,195,958 - Psest_2068 0.40 +0.9 2,195,958 - Psest_2068 0.40 +2.0 2,195,984 + Psest_2068 0.41 +0.9 2,195,985 - Psest_2068 0.41 +1.1 2,195,985 - Psest_2068 0.41 +1.1 2,195,985 - Psest_2068 0.41 -0.3 2,195,985 - Psest_2068 0.41 +0.2 2,195,985 - Psest_2068 0.41 +0.5 2,196,198 - Psest_2068 0.53 -0.4 2,196,198 - Psest_2068 0.53 -0.8 2,196,198 - Psest_2068 0.53 -0.3 2,196,198 - Psest_2068 0.53 +0.8 2,196,198 - Psest_2068 0.53 +0.6
Or see this region's nucleotide sequence