Experiment: L-Lactate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_1656 and Psest_1657 overlap by 8 nucleotides Psest_1657 and Psest_1658 are separated by 2 nucleotides Psest_1658 and Psest_1659 overlap by 1 nucleotides
Psest_1656: Psest_1656 - NADH:ubiquinone oxidoreductase, Na(+)-translocating, B subunit, at 1,766,213 to 1,767,424
_1656
Psest_1657: Psest_1657 - NADH:ubiquinone oxidoreductase, Na(+)-translocating, C subunit, at 1,767,417 to 1,768,211
_1657
Psest_1658: Psest_1658 - NADH:ubiquinone oxidoreductase, Na(+)-translocating, D subunit, at 1,768,214 to 1,768,882
_1658
Psest_1659: Psest_1659 - NADH:ubiquinone oxidoreductase, Na(+)-translocating, E subunit, at 1,768,882 to 1,769,490
_1659
Position (kb)
1767
1768
1769 Strain fitness (log2 ratio)
-1
0
1
2
3 at 1766.576 kb on + strand, within Psest_1656 at 1766.576 kb on + strand, within Psest_1656 at 1766.591 kb on + strand, within Psest_1656 at 1766.591 kb on + strand, within Psest_1656 at 1767.172 kb on + strand, within Psest_1656 at 1767.172 kb on + strand, within Psest_1656 at 1767.415 kb on + strand at 1767.415 kb on + strand at 1767.415 kb on + strand at 1767.422 kb on + strand at 1767.798 kb on + strand, within Psest_1657 at 1767.798 kb on + strand, within Psest_1657 at 1767.798 kb on + strand, within Psest_1657 at 1767.800 kb on + strand, within Psest_1657 at 1767.800 kb on + strand, within Psest_1657 at 1767.800 kb on + strand, within Psest_1657 at 1768.187 kb on + strand at 1768.487 kb on + strand, within Psest_1658 at 1768.716 kb on + strand, within Psest_1658 at 1768.891 kb on + strand at 1769.059 kb on + strand, within Psest_1659 at 1769.060 kb on - strand, within Psest_1659 at 1769.065 kb on + strand, within Psest_1659 at 1769.140 kb on + strand, within Psest_1659 at 1769.140 kb on + strand, within Psest_1659 at 1769.194 kb on + strand, within Psest_1659 at 1769.209 kb on + strand, within Psest_1659
Per-strain Table
Position Strand Gene LocusTag Fraction L-Lactate (C) remove 1,766,576 + Psest_1656 0.30 +3.0 1,766,576 + Psest_1656 0.30 +1.5 1,766,591 + Psest_1656 0.31 +1.9 1,766,591 + Psest_1656 0.31 +1.1 1,767,172 + Psest_1656 0.79 +1.1 1,767,172 + Psest_1656 0.79 +0.8 1,767,415 + +0.2 1,767,415 + +1.9 1,767,415 + +1.2 1,767,422 + +1.9 1,767,798 + Psest_1657 0.48 +3.1 1,767,798 + Psest_1657 0.48 +0.7 1,767,798 + Psest_1657 0.48 +2.8 1,767,800 + Psest_1657 0.48 -0.5 1,767,800 + Psest_1657 0.48 +0.1 1,767,800 + Psest_1657 0.48 +0.5 1,768,187 + +1.7 1,768,487 + Psest_1658 0.41 +2.4 1,768,716 + Psest_1658 0.75 +0.9 1,768,891 + +3.1 1,769,059 + Psest_1659 0.29 -0.1 1,769,060 - Psest_1659 0.29 +2.9 1,769,065 + Psest_1659 0.30 -0.5 1,769,140 + Psest_1659 0.42 -0.1 1,769,140 + Psest_1659 0.42 -0.4 1,769,194 + Psest_1659 0.51 +2.0 1,769,209 + Psest_1659 0.54 +0.3
Or see this region's nucleotide sequence