Experiment: L-Lactate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_1654 and Psest_1655 are separated by 334 nucleotides Psest_1655 and Psest_1656 are separated by 3 nucleotides
Psest_1654: Psest_1654 - glyceraldehyde-3-phosphate dehydrogenase, type I, at 1,763,086 to 1,764,537
_1654
Psest_1655: Psest_1655 - NADH:ubiquinone oxidoreductase, Na(+)-translocating, A subunit, at 1,764,872 to 1,766,209
_1655
Psest_1656: Psest_1656 - NADH:ubiquinone oxidoreductase, Na(+)-translocating, B subunit, at 1,766,213 to 1,767,424
_1656
Position (kb)
1764
1765
1766
1767 Strain fitness (log2 ratio)
-1
0
1
2
3
4 at 1764.729 kb on + strand at 1764.729 kb on + strand at 1764.784 kb on + strand at 1764.807 kb on + strand at 1764.880 kb on + strand at 1765.877 kb on + strand, within Psest_1655 at 1765.877 kb on + strand, within Psest_1655 at 1765.877 kb on + strand, within Psest_1655 at 1765.877 kb on + strand, within Psest_1655 at 1765.877 kb on + strand, within Psest_1655 at 1765.919 kb on + strand, within Psest_1655 at 1765.919 kb on + strand, within Psest_1655 at 1765.919 kb on + strand, within Psest_1655 at 1765.919 kb on + strand, within Psest_1655 at 1765.919 kb on + strand, within Psest_1655 at 1765.919 kb on + strand, within Psest_1655 at 1765.919 kb on + strand, within Psest_1655 at 1765.919 kb on + strand, within Psest_1655 at 1765.919 kb on + strand, within Psest_1655 at 1765.919 kb on + strand, within Psest_1655 at 1765.919 kb on + strand, within Psest_1655 at 1765.919 kb on + strand, within Psest_1655 at 1765.920 kb on - strand, within Psest_1655 at 1765.920 kb on - strand, within Psest_1655 at 1765.920 kb on - strand, within Psest_1655 at 1765.920 kb on - strand, within Psest_1655 at 1765.921 kb on + strand, within Psest_1655 at 1766.135 kb on + strand at 1766.135 kb on + strand at 1766.135 kb on + strand at 1766.135 kb on + strand at 1766.270 kb on + strand at 1766.401 kb on + strand, within Psest_1656 at 1766.576 kb on + strand, within Psest_1656 at 1766.576 kb on + strand, within Psest_1656 at 1766.591 kb on + strand, within Psest_1656 at 1766.591 kb on + strand, within Psest_1656 at 1767.172 kb on + strand, within Psest_1656 at 1767.172 kb on + strand, within Psest_1656
Per-strain Table
Position Strand Gene LocusTag Fraction L-Lactate (C) remove 1,764,729 + -0.4 1,764,729 + -1.7 1,764,784 + +0.2 1,764,807 + +0.2 1,764,880 + +0.5 1,765,877 + Psest_1655 0.75 +1.1 1,765,877 + Psest_1655 0.75 +0.8 1,765,877 + Psest_1655 0.75 +1.1 1,765,877 + Psest_1655 0.75 +0.2 1,765,877 + Psest_1655 0.75 +0.1 1,765,919 + Psest_1655 0.78 +0.7 1,765,919 + Psest_1655 0.78 +1.2 1,765,919 + Psest_1655 0.78 +1.7 1,765,919 + Psest_1655 0.78 +0.5 1,765,919 + Psest_1655 0.78 +3.3 1,765,919 + Psest_1655 0.78 +1.3 1,765,919 + Psest_1655 0.78 +1.9 1,765,919 + Psest_1655 0.78 -0.1 1,765,919 + Psest_1655 0.78 +0.6 1,765,919 + Psest_1655 0.78 +1.5 1,765,919 + Psest_1655 0.78 -1.3 1,765,919 + Psest_1655 0.78 +0.9 1,765,920 - Psest_1655 0.78 +2.1 1,765,920 - Psest_1655 0.78 -1.1 1,765,920 - Psest_1655 0.78 -0.5 1,765,920 - Psest_1655 0.78 +4.1 1,765,921 + Psest_1655 0.78 -0.4 1,766,135 + +1.8 1,766,135 + +1.5 1,766,135 + +1.8 1,766,135 + +1.5 1,766,270 + +2.3 1,766,401 + Psest_1656 0.16 -0.9 1,766,576 + Psest_1656 0.30 +3.0 1,766,576 + Psest_1656 0.30 +1.5 1,766,591 + Psest_1656 0.31 +1.9 1,766,591 + Psest_1656 0.31 +1.1 1,767,172 + Psest_1656 0.79 +1.1 1,767,172 + Psest_1656 0.79 +0.8
Or see this region's nucleotide sequence