Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_2971

Experiment: D-Lactate (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Lactate (C)
3,165,444	+		Psest_2970	0.14	-2.2
3,165,444	+		Psest_2970	0.14	-0.5
3,165,444	+		Psest_2970	0.14	+0.8
3,165,444	+		Psest_2970	0.14	-1.2
3,165,444	+		Psest_2970	0.14	+0.7
3,165,444	+		Psest_2970	0.14	+0.8
3,165,444	+		Psest_2970	0.14	+0.4
3,165,444	+		Psest_2970	0.14	-1.5
3,165,445	-		Psest_2970	0.14	+0.3
3,165,445	-		Psest_2970	0.14	+0.2
3,165,445	-		Psest_2970	0.14	+0.5
3,165,445	-		Psest_2970	0.14	-0.7
3,165,445	-		Psest_2970	0.14	-1.5
3,165,445	-		Psest_2970	0.14	+0.1
3,165,445	-		Psest_2970	0.14	-0.6
3,165,445	-		Psest_2970	0.14	-0.4
3,165,445	-		Psest_2970	0.14	+0.3
3,165,445	-		Psest_2970	0.14	+0.1
3,165,445	-		Psest_2970	0.14	+2.5
3,165,454	+		Psest_2970	0.15	-0.3
3,165,454	+		Psest_2970	0.15	+1.5
3,165,454	+		Psest_2970	0.15	-0.1
3,165,454	+		Psest_2970	0.15	+0.1
3,165,454	+		Psest_2970	0.15	-1.9
3,165,454	+		Psest_2970	0.15	-0.0
3,165,454	+		Psest_2970	0.15	+0.7
3,165,454	+		Psest_2970	0.15	-0.5
3,165,455	-		Psest_2970	0.15	-0.3
3,165,455	-		Psest_2970	0.15	-0.4
3,165,455	-		Psest_2970	0.15	-0.3
3,165,455	-		Psest_2970	0.15	+0.8
3,165,455	-		Psest_2970	0.15	+0.2
3,165,455	-		Psest_2970	0.15	-2.7
3,165,455	-		Psest_2970	0.15	-0.4
3,165,455	-		Psest_2970	0.15	+0.4
3,165,455	-		Psest_2970	0.15	+0.8
3,165,455	-		Psest_2970	0.15	-2.7
3,165,455	-		Psest_2970	0.15	+0.7
3,165,455	-		Psest_2970	0.15	-0.1
3,165,455	-		Psest_2970	0.15	-0.3
3,165,455	-		Psest_2970	0.15	+0.5
3,165,455	-		Psest_2970	0.15	+0.5
3,165,455	-		Psest_2970	0.15	-1.7
3,165,455	-		Psest_2970	0.15	-0.0
3,165,456	+		Psest_2970	0.15	-0.1
3,165,456	+		Psest_2970	0.15	+0.2
3,165,456	+		Psest_2970	0.15	-1.1
3,165,456	+		Psest_2970	0.15	-0.6
3,165,456	+		Psest_2970	0.15	-0.5
3,165,456	+		Psest_2970	0.15	-0.0
3,165,456	+		Psest_2970	0.15	+0.5
3,165,456	+		Psest_2970	0.15	-1.8
3,165,457	-		Psest_2970	0.15	-0.3
3,165,457	-		Psest_2970	0.15	-0.5
3,165,457	-		Psest_2970	0.15	-0.2
3,165,457	-		Psest_2970	0.15	-0.5
3,165,457	-		Psest_2970	0.15	-0.4
3,165,457	-		Psest_2970	0.15	+1.4
3,165,457	-		Psest_2970	0.15	+0.9
3,165,457	-		Psest_2970	0.15	-0.3
3,165,457	-		Psest_2970	0.15	-0.6
3,165,506	+		Psest_2970	0.21	-0.3
3,165,507	-		Psest_2970	0.21	+1.4
3,165,507	-		Psest_2970	0.21	+0.7
3,165,507	-		Psest_2970	0.21	-0.3
3,165,532	-		Psest_2970	0.23	-0.1
3,165,597	-		Psest_2970	0.30	+0.4
3,165,643	+		Psest_2970	0.35	+0.8
3,165,644	-		Psest_2970	0.35	+1.8
3,165,645	+		Psest_2970	0.36	+0.1
3,165,646	-		Psest_2970	0.36	+0.8
3,165,646	-		Psest_2970	0.36	-3.7
3,165,646	-		Psest_2970	0.36	-2.1
3,165,646	-		Psest_2970	0.36	-1.0
3,165,851	+		Psest_2970	0.58	-0.4
3,165,956	+		Psest_2970	0.69	+1.4
3,165,956	+		Psest_2970	0.69	+0.6
3,165,956	+		Psest_2970	0.69	-1.0
3,165,957	-		Psest_2970	0.69	-1.5
3,165,957	-		Psest_2970	0.69	+0.6
3,165,957	-		Psest_2970	0.69	+0.8
3,165,957	-		Psest_2970	0.69	-0.1
3,165,957	-		Psest_2970	0.69	+0.9
3,166,041	+		Psest_2970	0.78	+0.3
3,166,042	-		Psest_2970	0.78	-0.1
3,166,042	-		Psest_2970	0.78	-0.6
3,166,042	-		Psest_2970	0.78	-2.5
3,166,042	-		Psest_2970	0.78	-0.1
3,166,135	+		Psest_2970	0.88	+1.4
3,166,135	+		Psest_2970	0.88	+0.5
3,166,136	-		Psest_2970	0.88	-0.3
3,166,148	+		Psest_2970	0.89	-0.5
3,166,234	+				+0.2
3,166,235	-				+0.2
3,166,272	-				-0.3
3,166,272	-				-1.1
3,166,272	-				+1.3
3,166,272	-				-0.2
3,166,289	+				-0.9
3,166,292	+				+2.2
3,166,293	-				-0.2
3,166,336	+				-0.5
3,166,336	+				-1.0
3,166,337	-				+0.4
3,166,337	-				+0.5
3,166,450	+		Psest_2971	0.17	-0.9
3,166,485	+		Psest_2971	0.21	+0.5
3,166,494	-		Psest_2971	0.22	+0.3
3,166,494	-		Psest_2971	0.22	+0.1
3,166,494	-		Psest_2971	0.22	+0.8
3,166,494	-		Psest_2971	0.22	+0.3
3,166,497	+		Psest_2971	0.23	+1.3
3,166,497	+		Psest_2971	0.23	+0.4
3,166,497	+		Psest_2971	0.23	+0.5
3,166,498	-		Psest_2971	0.23	+0.0
3,166,498	-		Psest_2971	0.23	+0.8
3,166,498	-		Psest_2971	0.23	+0.7
3,166,498	-		Psest_2971	0.23	+0.3
3,166,726	-		Psest_2971	0.53	+0.0
3,166,821	+		Psest_2971	0.66	-0.1
3,166,821	+		Psest_2971	0.66	+0.9
3,166,822	-		Psest_2971	0.66	+1.0
3,166,822	-		Psest_2971	0.66	-0.2
3,166,899	+		Psest_2971	0.76	+0.3
3,167,029	-				+0.3
3,167,075	+				-0.8
3,167,075	+				+0.5
3,167,075	+				-0.2
3,167,075	+				-0.3
3,167,075	+				-1.0
3,167,076	-				+1.9
3,167,076	-				+0.1
3,167,076	-				-0.6
3,167,076	-				-1.3
3,167,076	-				-1.3
3,167,076	-				-1.8
3,167,495	+				-0.7
3,167,750	+		Psest_2973	0.41	-0.0
3,167,750	+		Psest_2973	0.41	-1.3
3,167,751	-		Psest_2973	0.41	-0.4
3,167,751	-		Psest_2973	0.41	-0.1
3,167,803	+		Psest_2973	0.52	-0.8
3,167,803	+		Psest_2973	0.52	-0.0
3,167,803	+		Psest_2973	0.52	-0.9
3,167,803	+		Psest_2973	0.52	+0.5
3,167,804	-		Psest_2973	0.52	-0.2
3,167,804	-		Psest_2973	0.52	+0.5
3,167,804	-		Psest_2973	0.52	+1.0
3,167,930	+		Psest_2973	0.79	+0.5
3,167,930	+		Psest_2973	0.79	-1.0
3,167,968	+		Psest_2973	0.87	-0.6
3,167,968	+		Psest_2973	0.87	+1.5
3,167,969	-		Psest_2973	0.87	+0.2
3,168,058	-				+0.4