Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_2959

Experiment: D-Lactate (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Lactate (C)
3,153,284	-		Psest_2958	0.27	+1.2
3,153,438	+		Psest_2958	0.39	+0.3
3,153,486	-		Psest_2958	0.43	-0.1
3,153,491	-		Psest_2958	0.43	+0.2
3,153,491	-		Psest_2958	0.43	-0.3
3,153,491	-		Psest_2958	0.43	+0.3
3,153,491	-		Psest_2958	0.43	+1.0
3,153,491	-		Psest_2958	0.43	-1.1
3,153,491	-		Psest_2958	0.43	-2.0
3,153,491	-		Psest_2958	0.43	-0.7
3,153,491	-		Psest_2958	0.43	+1.0
3,153,494	+		Psest_2958	0.43	-0.3
3,153,494	+		Psest_2958	0.43	-0.6
3,153,494	+		Psest_2958	0.43	+1.0
3,153,494	+		Psest_2958	0.43	+0.4
3,153,495	-		Psest_2958	0.43	+0.8
3,153,511	-		Psest_2958	0.45	-1.1
3,153,511	-		Psest_2958	0.45	-0.6
3,153,518	-		Psest_2958	0.45	-0.4
3,153,518	-		Psest_2958	0.45	-0.7
3,153,639	-		Psest_2958	0.55	+0.0
3,153,675	+		Psest_2958	0.58	+0.4
3,153,694	+		Psest_2958	0.59	-0.1
3,153,694	+		Psest_2958	0.59	+0.4
3,153,696	+		Psest_2958	0.59	-0.8
3,153,747	-		Psest_2958	0.63	+0.1
3,153,750	+		Psest_2958	0.64	-1.1
3,153,750	+		Psest_2958	0.64	+0.1
3,153,750	+		Psest_2958	0.64	+0.0
3,153,751	-		Psest_2958	0.64	+0.0
3,153,751	-		Psest_2958	0.64	+0.8
3,153,751	-		Psest_2958	0.64	+0.5
3,153,751	-		Psest_2958	0.64	+0.7
3,153,751	-		Psest_2958	0.64	+0.0
3,153,751	-		Psest_2958	0.64	+0.6
3,153,751	-		Psest_2958	0.64	-0.2
3,153,751	-		Psest_2958	0.64	+0.8
3,153,752	+		Psest_2958	0.64	+1.2
3,153,752	+		Psest_2958	0.64	+0.5
3,153,753	-		Psest_2958	0.64	+0.3
3,153,753	-		Psest_2958	0.64	-0.2
3,153,753	-		Psest_2958	0.64	-0.1
3,153,753	-		Psest_2958	0.64	+0.6
3,153,753	-		Psest_2958	0.64	+0.5
3,153,808	+		Psest_2958	0.68	+1.0
3,153,808	+		Psest_2958	0.68	+0.3
3,153,809	-		Psest_2958	0.68	+0.2
3,153,809	-		Psest_2958	0.68	-0.2
3,153,809	-		Psest_2958	0.68	+0.4
3,153,812	+		Psest_2958	0.68	-0.4
3,153,812	+		Psest_2958	0.68	-0.4
3,153,813	-		Psest_2958	0.68	-1.2
3,153,813	-		Psest_2958	0.68	+0.2
3,153,871	-		Psest_2958	0.73	-1.6
3,153,960	+		Psest_2958	0.80	+0.6
3,153,994	-		Psest_2958	0.83	+0.3
3,154,028	+		Psest_2958	0.85	-1.8
3,154,028	+		Psest_2958	0.85	+0.4
3,154,029	-		Psest_2958	0.86	-1.0
3,154,029	-		Psest_2958	0.86	+1.6
3,154,029	-		Psest_2958	0.86	+0.0
3,154,029	-		Psest_2958	0.86	-0.5
3,154,029	-		Psest_2958	0.86	+0.3
3,154,057	+		Psest_2958	0.88	+0.5
3,154,058	-		Psest_2958	0.88	+0.2
3,154,058	-		Psest_2958	0.88	+0.3
3,154,058	-		Psest_2958	0.88	-0.1
3,154,154	+				+0.2
3,154,154	+				-1.2
3,154,154	+				+0.2
3,154,154	+				-0.3
3,154,158	+				+1.0
3,154,159	-				+1.0
3,154,159	-				+0.2
3,154,213	-				-0.7
3,154,213	-				+1.8
3,154,213	-				-0.2
3,154,213	-				-1.8
3,154,249	-				-0.7
3,154,295	+				-0.6
3,154,295	+				-0.2
3,154,295	+				+0.0
3,154,295	+				+0.9
3,154,295	+				-0.1
3,154,295	+				+0.8
3,154,295	+				+0.0
3,154,295	+				+0.2
3,154,295	+				+0.5
3,154,295	+				+2.2
3,154,296	-				+0.2
3,154,296	-				+0.8
3,154,296	-				-0.7
3,154,296	-				+0.1
3,154,298	+				+0.8
3,154,298	+				-0.7
3,154,298	+				+0.7
3,154,298	+				-0.4
3,154,507	+		Psest_2959	0.14	+0.5
3,154,637	+		Psest_2959	0.20	+0.8
3,154,637	+		Psest_2959	0.20	+0.2
3,154,638	-		Psest_2959	0.20	+0.1
3,154,638	-		Psest_2959	0.20	+1.7
3,154,668	+		Psest_2959	0.22	+1.3
3,154,669	-		Psest_2959	0.22	+0.0
3,154,773	-		Psest_2959	0.27	-0.0
3,154,837	+		Psest_2959	0.30	+0.5
3,154,838	-		Psest_2959	0.30	+0.5
3,155,017	+		Psest_2959	0.39	+0.6
3,155,017	+		Psest_2959	0.39	+1.3
3,155,119	+		Psest_2959	0.44	+0.4
3,155,141	+		Psest_2959	0.45	+0.7
3,155,142	-		Psest_2959	0.45	-0.6
3,155,142	-		Psest_2959	0.45	+1.1
3,155,142	-		Psest_2959	0.45	+0.3
3,155,212	-		Psest_2959	0.49	+0.4
3,155,261	+		Psest_2959	0.51	+0.5
3,155,261	+		Psest_2959	0.51	-1.6
3,155,261	+		Psest_2959	0.51	-1.2
3,155,262	-		Psest_2959	0.51	-0.3
3,155,262	-		Psest_2959	0.51	-1.7
3,155,262	-		Psest_2959	0.51	-0.2
3,155,569	-		Psest_2959	0.67	+0.8
3,155,596	+		Psest_2959	0.68	-0.1
3,155,596	+		Psest_2959	0.68	-0.1
3,155,596	+		Psest_2959	0.68	-0.5
3,155,596	+		Psest_2959	0.68	+0.5
3,155,597	-		Psest_2959	0.68	+0.8
3,155,597	-		Psest_2959	0.68	+1.1
3,155,597	-		Psest_2959	0.68	+0.3
3,155,597	-		Psest_2959	0.68	-0.1
3,155,612	+		Psest_2959	0.69	+1.0
3,155,670	+		Psest_2959	0.72	+0.9
3,155,734	+		Psest_2959	0.75	+0.8
3,155,798	+		Psest_2959	0.78	-0.1
3,155,799	-		Psest_2959	0.78	+1.7
3,155,934	+		Psest_2959	0.85	+2.0
3,155,934	+		Psest_2959	0.85	+0.9
3,155,935	-		Psest_2959	0.85	+0.6
3,155,978	+		Psest_2959	0.87	+0.3
3,155,978	+		Psest_2959	0.87	+0.5
3,155,979	-		Psest_2959	0.87	+2.0
3,155,979	-		Psest_2959	0.87	+0.9
3,155,979	-		Psest_2959	0.87	+0.1
3,156,006	+		Psest_2959	0.88	-0.8
3,156,006	+		Psest_2959	0.88	+0.2
3,156,006	+		Psest_2959	0.88	+0.5
3,156,006	+		Psest_2959	0.88	+0.5
3,156,006	+		Psest_2959	0.88	-0.1
3,156,007	-		Psest_2959	0.88	-0.1
3,156,007	-		Psest_2959	0.88	-0.9
3,156,007	-		Psest_2959	0.88	+1.5
3,156,007	-		Psest_2959	0.88	+0.3
3,156,007	-		Psest_2959	0.88	+0.1
3,156,009	+		Psest_2959	0.88	+1.2
3,156,009	+		Psest_2959	0.88	+1.0
3,156,009	+		Psest_2959	0.88	+1.1
3,156,009	+		Psest_2959	0.88	+0.8
3,156,009	+		Psest_2959	0.88	+1.4
3,156,009	+		Psest_2959	0.88	+0.8
3,156,009	+		Psest_2959	0.88	-0.5
3,156,010	-		Psest_2959	0.89	+1.2
3,156,010	-		Psest_2959	0.89	+0.1
3,156,010	-		Psest_2959	0.89	+1.1
3,156,010	-		Psest_2959	0.89	-0.8
3,156,010	-		Psest_2959	0.89	+0.3
3,156,010	-		Psest_2959	0.89	-0.1
3,156,010	-		Psest_2959	0.89	+0.1
3,156,010	-		Psest_2959	0.89	-0.3
3,156,010	-		Psest_2959	0.89	-1.3
3,156,010	-		Psest_2959	0.89	+0.6
3,156,010	-		Psest_2959	0.89	-0.2
3,156,010	-		Psest_2959	0.89	-0.2
3,156,013	-		Psest_2959	0.89	-1.1
3,156,013	-		Psest_2959	0.89	+0.3
3,156,013	-		Psest_2959	0.89	+0.1
3,156,041	+				+0.9
3,156,041	+				+0.4
3,156,041	+				-0.5
3,156,083	+				+0.5
3,156,083	+				-1.2
3,156,083	+				-1.5
3,156,151	-				-0.2
3,156,229	+				+0.7
3,156,230	-				-2.7
3,156,296	+				+1.4
3,156,296	+				-0.7
3,156,296	+				+1.0
3,156,296	+				-0.7
3,156,296	+				-0.1
3,156,297	-				+2.8
3,156,297	-				-2.4
3,156,297	-				-0.2
3,156,297	-				+0.7
3,156,370	+		Psest_2960	0.11	+0.4
3,156,492	-		Psest_2960	0.21	-0.0
3,156,537	-		Psest_2960	0.25	+0.3
3,156,914	-		Psest_2960	0.57	-1.3
3,157,172	+		Psest_2960	0.79	-0.6
3,157,172	+		Psest_2960	0.79	-0.8
3,157,172	+		Psest_2960	0.79	+0.0
3,157,172	+		Psest_2960	0.79	-0.1
3,157,172	+		Psest_2960	0.79	+0.6
3,157,172	+		Psest_2960	0.79	+0.4
3,157,172	+		Psest_2960	0.79	+0.9
3,157,172	+		Psest_2960	0.79	-0.3
3,157,172	+		Psest_2960	0.79	+0.7
3,157,172	+		Psest_2960	0.79	+0.9
3,157,172	+		Psest_2960	0.79	+0.5
3,157,173	-		Psest_2960	0.79	-0.2
3,157,173	-		Psest_2960	0.79	+0.4
3,157,173	-		Psest_2960	0.79	+0.2
3,157,173	-		Psest_2960	0.79	+0.7
3,157,173	-		Psest_2960	0.79	+0.0
3,157,173	-		Psest_2960	0.79	-0.4
3,157,173	-		Psest_2960	0.79	-1.4
3,157,173	-		Psest_2960	0.79	+0.4
3,157,173	-		Psest_2960	0.79	-0.6
3,157,184	+		Psest_2960	0.80	+0.5
3,157,184	+		Psest_2960	0.80	+1.5
3,157,204	-		Psest_2960	0.82	+0.2