Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_2942

Experiment: D-Lactate (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Lactate (C)
3,138,735	-		Psest_2941	0.28	+0.2
3,138,895	-		Psest_2941	0.40	-0.2
3,139,022	+		Psest_2941	0.50	-0.4
3,139,022	+		Psest_2941	0.50	-0.6
3,139,022	+		Psest_2941	0.50	-0.3
3,139,023	-		Psest_2941	0.50	-1.8
3,139,094	+		Psest_2941	0.56	-0.3
3,139,095	-		Psest_2941	0.56	-0.6
3,139,095	-		Psest_2941	0.56	+0.6
3,139,095	-		Psest_2941	0.56	-0.5
3,139,095	-		Psest_2941	0.56	-2.7
3,139,095	-		Psest_2941	0.56	-0.5
3,139,095	-		Psest_2941	0.56	-0.2
3,139,095	-		Psest_2941	0.56	-0.2
3,139,124	+		Psest_2941	0.58	-0.8
3,139,143	-		Psest_2941	0.59	+0.1
3,139,143	-		Psest_2941	0.59	+0.2
3,139,143	-		Psest_2941	0.59	+0.2
3,139,169	+		Psest_2941	0.61	-1.1
3,139,170	-		Psest_2941	0.62	-1.2
3,139,170	-		Psest_2941	0.62	+0.3
3,139,170	-		Psest_2941	0.62	-0.2
3,139,379	+		Psest_2941	0.78	-0.6
3,139,379	+		Psest_2941	0.78	-0.5
3,139,379	+		Psest_2941	0.78	-0.0
3,139,379	+		Psest_2941	0.78	-0.9
3,139,379	+		Psest_2941	0.78	-0.0
3,139,380	-		Psest_2941	0.78	-0.5
3,139,380	-		Psest_2941	0.78	-1.2
3,139,380	-		Psest_2941	0.78	-1.3
3,139,380	-		Psest_2941	0.78	-2.2
3,139,418	+		Psest_2941	0.81	+0.0
3,139,418	+		Psest_2941	0.81	+0.5
3,139,419	-		Psest_2941	0.81	+0.4
3,139,419	-		Psest_2941	0.81	+1.2
3,139,419	-		Psest_2941	0.81	+0.5
3,139,463	+		Psest_2941	0.84	-1.5
3,139,478	+		Psest_2941	0.85	+0.1
3,139,478	+		Psest_2941	0.85	+0.5
3,139,478	+		Psest_2941	0.85	+1.0
3,139,479	-		Psest_2941	0.85	-0.6
3,139,642	+				-1.4
3,139,642	+				+0.9
3,139,642	+				-0.4
3,139,642	+				-0.2
3,139,642	+				-0.3
3,139,642	+				-0.5
3,139,642	+				+0.3
3,139,642	+				-2.4
3,139,642	+				+0.5
3,139,642	+				-0.1
3,139,642	+				-0.9
3,139,642	+				-0.5
3,139,642	+				-0.7
3,139,642	+				-1.6
3,139,642	+				+1.3
3,139,642	+				+1.0
3,139,642	+				-2.1
3,139,642	+				+0.1
3,139,643	-				-0.4
3,139,643	-				-3.1
3,139,643	-				+0.2
3,139,643	-				+0.6
3,139,643	-				-0.9
3,139,643	-				+0.5
3,139,643	-				+0.1
3,139,643	-				-0.5
3,139,643	-				-0.3
3,139,643	-				-0.9
3,139,643	-				-2.1
3,139,643	-				+0.2
3,139,643	-				-1.0
3,139,643	-				-0.1
3,139,643	-				-0.1
3,139,665	-				+0.4
3,139,827	+		Psest_2942	0.22	+2.3
3,139,828	-		Psest_2942	0.22	+0.1
3,139,828	-		Psest_2942	0.22	-0.1
3,139,860	+		Psest_2942	0.26	-0.1
3,139,861	-		Psest_2942	0.26	+0.1
3,139,861	-		Psest_2942	0.26	+0.4
3,139,861	-		Psest_2942	0.26	+0.5
3,139,861	-		Psest_2942	0.26	+0.5
3,139,861	-		Psest_2942	0.26	+0.2
3,139,861	-		Psest_2942	0.26	+0.6
3,139,861	-		Psest_2942	0.26	+0.0
3,139,920	+		Psest_2942	0.34	+1.2
3,139,921	-		Psest_2942	0.34	+0.2
3,139,921	-		Psest_2942	0.34	+0.4
3,139,921	-		Psest_2942	0.34	+0.7
3,139,921	-		Psest_2942	0.34	-0.5
3,140,145	+		Psest_2942	0.63	+0.6
3,140,385	+				+1.6
3,140,385	+				+0.0
3,140,385	+				+0.1
3,140,385	+				+0.5
3,140,386	-				+0.7
3,140,386	-				-0.4
3,140,389	+				+0.9
3,140,389	+				-0.2
3,140,389	+				+1.2
3,140,389	+				+0.6
3,140,389	+				-0.1
3,140,389	+				+0.5
3,140,389	+				-1.4
3,140,389	+				+0.1
3,140,389	+				-1.5
3,140,389	+				-1.0
3,140,389	+				+0.2
3,140,389	+				+0.1
3,140,389	+				+1.5
3,140,389	+				-0.2
3,140,389	+				+1.3
3,140,389	+				+0.7
3,140,389	+				-0.4
3,140,389	+				+0.2
3,140,389	+				-0.5
3,140,389	+				-0.7
3,140,389	+				-0.6
3,140,389	+				+0.1
3,140,389	+				+0.0
3,140,389	+				-0.5
3,140,389	+				+0.2
3,140,389	+				+0.2
3,140,389	+				+0.8
3,140,389	+				-0.3
3,140,389	+				-2.0
3,140,389	+				+0.6
3,140,389	+				-0.7
3,140,390	-				-0.3
3,140,390	-				-1.0
3,140,390	-				-0.4
3,140,390	-				-0.2
3,140,390	-				+0.4
3,140,390	-				-0.0
3,140,390	-				-0.7
3,140,390	-				+0.3
3,140,390	-				+0.9
3,140,390	-				+0.0
3,140,390	-				-1.1
3,140,390	-				+1.2
3,140,390	-				-0.3
3,140,390	-				+0.6
3,140,390	-				+0.8
3,140,390	-				-2.2
3,140,390	-				-0.6
3,140,390	-				+0.1
3,140,390	-				-0.0
3,140,390	-				-0.9
3,140,390	-				+1.0
3,140,390	-				+0.2
3,140,390	-				-0.4
3,140,390	-				-0.1
3,140,390	-				+0.5
3,140,391	+				-1.2
3,140,391	+				-0.0
3,140,391	+				-0.5
3,140,391	+				-1.7
3,140,391	+				+0.7
3,140,391	+				-0.1
3,140,391	+				-1.0
3,140,392	-				-0.0
3,140,392	-				+1.0
3,140,392	-				+1.1
3,140,392	-				-0.1
3,140,429	+				-0.0
3,140,448	-				-0.1
3,140,477	+				+0.4
3,140,477	+				+0.5
3,140,477	+				-0.4
3,140,477	+				-0.1
3,140,477	+				+0.2
3,140,478	-				+0.4
3,140,478	-				-0.1
3,140,478	-				+2.0
3,140,496	+				-0.0
3,140,672	+		Psest_2943	0.18	+1.6
3,140,672	+		Psest_2943	0.18	-2.0
3,140,723	+		Psest_2943	0.24	+1.0
3,140,723	+		Psest_2943	0.24	-3.1
3,140,723	+		Psest_2943	0.24	-2.0
3,140,723	+		Psest_2943	0.24	-0.0
3,140,723	+		Psest_2943	0.24	+1.1
3,140,723	+		Psest_2943	0.24	-0.6
3,140,723	+		Psest_2943	0.24	+1.6
3,140,723	+		Psest_2943	0.24	+1.4
3,140,723	+		Psest_2943	0.24	-0.1
3,140,723	+		Psest_2943	0.24	-0.2
3,140,724	-		Psest_2943	0.24	-1.3
3,140,724	-		Psest_2943	0.24	+0.4
3,140,724	-		Psest_2943	0.24	-1.0
3,140,724	-		Psest_2943	0.24	+0.6
3,140,724	-		Psest_2943	0.24	-1.0
3,140,724	-		Psest_2943	0.24	-0.6
3,140,724	-		Psest_2943	0.24	-0.1
3,140,724	-		Psest_2943	0.24	+0.2
3,140,724	-		Psest_2943	0.24	-0.3
3,140,724	-		Psest_2943	0.24	+1.3
3,140,724	-		Psest_2943	0.24	-2.0
3,140,724	-		Psest_2943	0.24	+0.0
3,140,724	-		Psest_2943	0.24	+0.5
3,140,724	-		Psest_2943	0.24	+0.9
3,140,724	-		Psest_2943	0.24	+0.6
3,140,724	-		Psest_2943	0.24	+0.9
3,140,724	-		Psest_2943	0.24	+0.5
3,140,724	-		Psest_2943	0.24	+0.1
3,140,724	-		Psest_2943	0.24	+0.1
3,140,724	-		Psest_2943	0.24	+0.3
3,140,724	-		Psest_2943	0.24	-0.2
3,140,724	-		Psest_2943	0.24	+0.4
3,140,724	-		Psest_2943	0.24	+0.8
3,140,724	-		Psest_2943	0.24	+0.6
3,140,724	-		Psest_2943	0.24	-0.1
3,140,724	-		Psest_2943	0.24	-0.9
3,140,724	-		Psest_2943	0.24	-0.1
3,140,724	-		Psest_2943	0.24	-0.5
3,140,725	+		Psest_2943	0.24	-0.2
3,140,726	-		Psest_2943	0.25	-0.7
3,140,726	-		Psest_2943	0.25	-4.1
3,141,128	+		Psest_2943	0.72	+0.5
3,141,128	+		Psest_2943	0.72	-0.0
3,141,128	+		Psest_2943	0.72	-0.2
3,141,128	+		Psest_2943	0.72	+0.5
3,141,128	+		Psest_2943	0.72	+0.1
3,141,128	+		Psest_2943	0.72	-0.5
3,141,128	+		Psest_2943	0.72	+0.3
3,141,128	+		Psest_2943	0.72	-0.1
3,141,128	+		Psest_2943	0.72	+0.6
3,141,128	+		Psest_2943	0.72	-0.2
3,141,128	+		Psest_2943	0.72	-0.1
3,141,128	+		Psest_2943	0.72	-1.3
3,141,128	+		Psest_2943	0.72	-0.4
3,141,129	-		Psest_2943	0.72	-0.5
3,141,129	-		Psest_2943	0.72	+0.4
3,141,129	-		Psest_2943	0.72	-0.7
3,141,129	-		Psest_2943	0.72	+0.1
3,141,129	-		Psest_2943	0.72	-1.3
3,141,129	-		Psest_2943	0.72	+0.2
3,141,129	-		Psest_2943	0.72	+0.5
3,141,129	-		Psest_2943	0.72	+1.0
3,141,129	-		Psest_2943	0.72	+0.5
3,141,129	-		Psest_2943	0.72	-0.6
3,141,129	-		Psest_2943	0.72	-0.4
3,141,129	-		Psest_2943	0.72	+0.9
3,141,132	+		Psest_2943	0.73	+0.3
3,141,132	+		Psest_2943	0.73	+0.2
3,141,132	+		Psest_2943	0.73	+0.2
3,141,132	+		Psest_2943	0.73	-1.3
3,141,132	+		Psest_2943	0.73	+0.9
3,141,132	+		Psest_2943	0.73	+0.1
3,141,132	+		Psest_2943	0.73	+0.6
3,141,132	+		Psest_2943	0.73	-0.9
3,141,132	+		Psest_2943	0.73	+0.0
3,141,132	+		Psest_2943	0.73	-0.8
3,141,132	+		Psest_2943	0.73	+0.3
3,141,132	+		Psest_2943	0.73	-2.2
3,141,132	+		Psest_2943	0.73	-0.3
3,141,133	-		Psest_2943	0.73	-0.0
3,141,133	-		Psest_2943	0.73	+0.0
3,141,133	-		Psest_2943	0.73	-0.7
3,141,133	-		Psest_2943	0.73	+0.1
3,141,133	-		Psest_2943	0.73	+0.1
3,141,133	-		Psest_2943	0.73	-0.2
3,141,133	-		Psest_2943	0.73	+0.3
3,141,133	-		Psest_2943	0.73	-0.5
3,141,133	-		Psest_2943	0.73	+0.1
3,141,134	+		Psest_2943	0.73	+1.5
3,141,134	+		Psest_2943	0.73	-0.1
3,141,135	-		Psest_2943	0.73	+0.6
3,141,135	-		Psest_2943	0.73	-0.1
3,141,135	-		Psest_2943	0.73	-1.3
3,141,135	-		Psest_2943	0.73	+1.3
3,141,135	-		Psest_2943	0.73	-0.1
3,141,216	+		Psest_2943	0.83	-0.1
3,141,216	+		Psest_2943	0.83	-0.2
3,141,216	+		Psest_2943	0.83	-0.6
3,141,216	+		Psest_2943	0.83	+1.8