Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_3685

Experiment: acetate (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	acetate (C)
3,849,774	+		Psest_3684	0.54	-1.9
3,849,775	-		Psest_3684	0.54	-0.9
3,850,137	+		Psest_3684	0.74	+1.6
3,850,137	+		Psest_3684	0.74	-0.5
3,850,137	+		Psest_3684	0.74	+1.3
3,850,137	+		Psest_3684	0.74	+1.3
3,850,137	+		Psest_3684	0.74	-0.2
3,850,137	+		Psest_3684	0.74	-0.8
3,850,137	+		Psest_3684	0.74	-0.3
3,850,138	-		Psest_3684	0.74	+1.3
3,850,138	-		Psest_3684	0.74	+0.8
3,850,138	-		Psest_3684	0.74	-1.5
3,850,138	-		Psest_3684	0.74	+0.5
3,850,138	-		Psest_3684	0.74	-0.3
3,850,140	-		Psest_3684	0.75	-2.6
3,850,140	-		Psest_3684	0.75	+0.3
3,850,140	-		Psest_3684	0.75	+0.0
3,850,140	-		Psest_3684	0.75	+0.1
3,850,240	+		Psest_3684	0.80	-0.5
3,850,291	-		Psest_3684	0.83	+0.5
3,850,291	-		Psest_3684	0.83	-1.4
3,850,379	+		Psest_3684	0.88	-0.1
3,850,380	-		Psest_3684	0.88	+0.9
3,850,380	-		Psest_3684	0.88	+0.7
3,850,476	+				-0.7
3,850,476	+				+0.0
3,850,476	+				+2.3
3,850,476	+				-1.6
3,850,476	+				-0.2
3,850,477	-				-0.2
3,850,477	-				+0.9
3,850,478	+				+0.7
3,850,762	+				-1.3
3,850,762	+				+1.4
3,850,762	+				+0.2
3,850,763	-				-1.6
3,850,777	+				+0.6
3,850,777	+				-0.4
3,850,778	-				-0.3
3,850,778	-				+0.1
3,850,778	-				+2.1
3,850,778	-				+0.1
3,850,840	+		Psest_3685	0.12	-1.4
3,850,840	+		Psest_3685	0.12	-1.7
3,850,840	+		Psest_3685	0.12	-0.1
3,850,840	+		Psest_3685	0.12	-0.5
3,850,840	+		Psest_3685	0.12	+1.5
3,850,840	+		Psest_3685	0.12	-1.2
3,850,840	+		Psest_3685	0.12	+0.3
3,850,840	+		Psest_3685	0.12	-0.3
3,850,840	+		Psest_3685	0.12	-0.7
3,850,840	+		Psest_3685	0.12	-0.2
3,850,840	+		Psest_3685	0.12	-0.3
3,850,840	+		Psest_3685	0.12	-1.2
3,850,840	+		Psest_3685	0.12	-0.2
3,850,840	+		Psest_3685	0.12	+0.2
3,850,840	+		Psest_3685	0.12	-1.7
3,850,840	+		Psest_3685	0.12	+0.0
3,850,840	+		Psest_3685	0.12	+1.5
3,850,840	+		Psest_3685	0.12	+2.0
3,850,840	+		Psest_3685	0.12	+1.5
3,850,840	+		Psest_3685	0.12	+0.9
3,850,840	+		Psest_3685	0.12	-0.4
3,850,840	+		Psest_3685	0.12	-0.5
3,850,840	+		Psest_3685	0.12	+1.5
3,850,841	-		Psest_3685	0.12	+0.6
3,850,841	-		Psest_3685	0.12	-1.2
3,850,841	-		Psest_3685	0.12	-0.2
3,850,841	-		Psest_3685	0.12	+0.6
3,850,841	-		Psest_3685	0.12	+1.0
3,850,841	-		Psest_3685	0.12	+1.1
3,850,841	-		Psest_3685	0.12	+0.1
3,850,841	-		Psest_3685	0.12	-1.7
3,850,841	-		Psest_3685	0.12	+0.4
3,850,841	-		Psest_3685	0.12	-2.0
3,850,841	-		Psest_3685	0.12	+0.6
3,850,841	-		Psest_3685	0.12	+3.3
3,850,841	-		Psest_3685	0.12	-0.4
3,850,842	+		Psest_3685	0.12	+0.1
3,850,842	+		Psest_3685	0.12	-0.5
3,850,842	+		Psest_3685	0.12	+1.6
3,850,948	+		Psest_3685	0.20	+0.4
3,850,948	+		Psest_3685	0.20	+1.8
3,850,948	+		Psest_3685	0.20	-0.8
3,850,948	+		Psest_3685	0.20	+0.7
3,850,948	+		Psest_3685	0.20	-1.1
3,850,949	-		Psest_3685	0.21	+0.2
3,850,949	-		Psest_3685	0.21	+0.2
3,850,949	-		Psest_3685	0.21	+1.8
3,850,949	-		Psest_3685	0.21	+0.5
3,850,949	-		Psest_3685	0.21	+0.9
3,850,949	-		Psest_3685	0.21	-1.1
3,850,949	-		Psest_3685	0.21	+0.3
3,850,949	-		Psest_3685	0.21	-0.0
3,850,949	-		Psest_3685	0.21	-0.0
3,850,983	+		Psest_3685	0.23	+0.8
3,850,984	-		Psest_3685	0.23	+0.3
3,850,984	-		Psest_3685	0.23	+1.3
3,850,984	-		Psest_3685	0.23	+0.2
3,851,006	-		Psest_3685	0.25	+0.4
3,851,017	+		Psest_3685	0.26	+0.4
3,851,017	+		Psest_3685	0.26	+0.1
3,851,017	+		Psest_3685	0.26	+0.7
3,851,017	+		Psest_3685	0.26	-1.1
3,851,017	+		Psest_3685	0.26	-1.2
3,851,017	+		Psest_3685	0.26	-0.7
3,851,017	+		Psest_3685	0.26	-2.4
3,851,017	+		Psest_3685	0.26	-0.3
3,851,017	+		Psest_3685	0.26	-0.9
3,851,018	-		Psest_3685	0.26	-0.9
3,851,018	-		Psest_3685	0.26	-0.5
3,851,018	-		Psest_3685	0.26	-0.5
3,851,018	-		Psest_3685	0.26	+1.1
3,851,299	+		Psest_3685	0.48	-0.8
3,851,299	+		Psest_3685	0.48	+1.1
3,851,299	+		Psest_3685	0.48	+1.6
3,851,299	+		Psest_3685	0.48	+0.4
3,851,299	+		Psest_3685	0.48	+1.7
3,851,299	+		Psest_3685	0.48	+0.2
3,851,300	-		Psest_3685	0.48	+0.5
3,851,300	-		Psest_3685	0.48	-0.3
3,851,300	-		Psest_3685	0.48	-0.1
3,851,300	-		Psest_3685	0.48	+0.1
3,851,300	-		Psest_3685	0.48	-0.3
3,851,300	-		Psest_3685	0.48	+0.0
3,851,425	+		Psest_3685	0.58	+0.1
3,851,425	+		Psest_3685	0.58	+0.9
3,851,426	-		Psest_3685	0.58	-0.4
3,851,632	+		Psest_3685	0.74	+0.4
3,851,633	-		Psest_3685	0.74	-0.5
3,851,677	+		Psest_3685	0.77	+0.6
3,851,678	-		Psest_3685	0.78	+0.3
3,851,680	-		Psest_3685	0.78	+0.1
3,851,680	-		Psest_3685	0.78	-0.2
3,852,436	+				+0.5
3,852,464	+				-0.9
3,852,464	+				+0.2
3,852,464	+				-0.6
3,852,465	-				+3.2
3,852,465	-				-0.9
3,852,465	-				-0.4
3,852,465	-				+0.1
3,852,465	-				-0.8
3,852,465	-				-0.5
3,852,465	-				-1.1
3,852,465	-				+0.5
3,852,469	-				+0.3
3,852,520	+				-0.4
3,852,520	+				-0.2
3,852,520	+				-0.4
3,852,520	+				+0.4
3,852,520	+				-0.1
3,852,520	+				-0.4
3,852,520	+				-0.9
3,852,521	-				-0.9
3,852,521	-				-1.2
3,852,521	-				-0.3
3,852,541	+				-0.5
3,852,541	+				+0.7
3,852,542	-				-1.0
3,852,542	-				+1.1
3,852,545	+				-0.4
3,852,546	-				+1.5
3,852,546	-				-0.0
3,852,636	+				-0.2
3,852,678	+				-1.0
3,852,679	-				+0.2
3,852,758	-		Psest_3687	0.12	+0.1
3,852,795	+		Psest_3687	0.17	+0.2
3,852,795	+		Psest_3687	0.17	+0.4
3,852,795	+		Psest_3687	0.17	-0.2
3,852,795	+		Psest_3687	0.17	+2.4
3,852,795	+		Psest_3687	0.17	-0.5
3,852,795	+		Psest_3687	0.17	-0.2
3,852,795	+		Psest_3687	0.17	+0.1
3,852,795	+		Psest_3687	0.17	-0.6
3,852,796	-		Psest_3687	0.18	+0.2
3,852,796	-		Psest_3687	0.18	+0.3
3,852,796	-		Psest_3687	0.18	-1.2
3,852,796	-		Psest_3687	0.18	+0.6
3,852,796	-		Psest_3687	0.18	+0.1
3,852,796	-		Psest_3687	0.18	-2.1
3,852,796	-		Psest_3687	0.18	+2.1
3,852,796	-		Psest_3687	0.18	-0.4
3,852,849	+		Psest_3687	0.25	-0.4
3,852,849	+		Psest_3687	0.25	-0.3
3,852,849	+		Psest_3687	0.25	+0.6
3,852,850	-		Psest_3687	0.25	-1.0
3,852,850	-		Psest_3687	0.25	+0.9
3,852,850	-		Psest_3687	0.25	-0.9
3,852,902	+		Psest_3687	0.32	+0.4