Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_3289

Experiment: D-Gluconic Acid (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Gluconic Acid (C)
3,454,892	+		Psest_3288	0.63	+0.6
3,454,892	+		Psest_3288	0.63	-0.5
3,454,892	+		Psest_3288	0.63	-0.2
3,454,892	+		Psest_3288	0.63	-0.2
3,454,893	-		Psest_3288	0.63	+0.5
3,454,893	-		Psest_3288	0.63	+0.6
3,455,032	+		Psest_3288	0.71	+0.0
3,455,032	+		Psest_3288	0.71	-0.6
3,455,032	+		Psest_3288	0.71	-1.6
3,455,032	+		Psest_3288	0.71	-0.5
3,455,032	+		Psest_3288	0.71	-0.5
3,455,032	+		Psest_3288	0.71	-1.6
3,455,033	-		Psest_3288	0.72	-0.1
3,455,033	-		Psest_3288	0.72	-1.8
3,455,033	-		Psest_3288	0.72	-0.2
3,455,056	+		Psest_3288	0.73	+0.7
3,455,056	+		Psest_3288	0.73	-0.6
3,455,056	+		Psest_3288	0.73	-1.0
3,455,056	+		Psest_3288	0.73	-0.0
3,455,056	+		Psest_3288	0.73	-1.3
3,455,057	-		Psest_3288	0.73	+2.5
3,455,057	-		Psest_3288	0.73	-0.8
3,455,057	-		Psest_3288	0.73	-0.7
3,455,057	-		Psest_3288	0.73	+0.1
3,455,074	-		Psest_3288	0.74	-1.5
3,455,088	-		Psest_3288	0.75	-0.8
3,455,089	+		Psest_3288	0.75	+0.5
3,455,089	+		Psest_3288	0.75	+0.8
3,455,089	+		Psest_3288	0.75	+1.7
3,455,089	+		Psest_3288	0.75	+0.6
3,455,089	+		Psest_3288	0.75	+0.3
3,455,089	+		Psest_3288	0.75	-1.3
3,455,089	+		Psest_3288	0.75	+0.2
3,455,089	+		Psest_3288	0.75	-0.1
3,455,089	+		Psest_3288	0.75	-2.3
3,455,090	-		Psest_3288	0.75	+0.3
3,455,090	-		Psest_3288	0.75	-0.0
3,455,090	-		Psest_3288	0.75	-1.7
3,455,090	-		Psest_3288	0.75	+0.9
3,455,090	-		Psest_3288	0.75	-1.2
3,455,090	-		Psest_3288	0.75	+0.9
3,455,090	-		Psest_3288	0.75	-0.3
3,455,090	-		Psest_3288	0.75	+0.3
3,455,202	+		Psest_3288	0.81	-0.4
3,455,357	-				+0.2
3,455,393	+				+1.1
3,455,393	+				-0.8
3,455,393	+				-1.0
3,455,393	+				-0.1
3,455,393	+				-2.4
3,455,394	-				+0.7
3,455,394	-				-0.8
3,455,394	-				+0.4
3,455,398	-				-1.4
3,455,506	-				+0.3
3,455,518	-				-1.0
3,455,518	-				+0.9
3,455,518	-				+1.5
3,455,547	+				-1.0
3,455,549	+				+2.2
3,455,549	+				+0.4
3,455,549	+				-2.3
3,455,549	+				-1.1
3,455,549	+				-0.6
3,455,549	+				+0.7
3,455,549	+				-1.8
3,455,554	+				-0.5
3,455,554	+				+1.1
3,455,555	-				-0.3
3,455,555	-				+0.7
3,455,555	-				+1.6
3,455,555	-				-1.4
3,455,555	-				-0.5
3,455,555	-				+0.4
3,455,574	+				+0.4
3,455,574	+				-1.2
3,455,574	+				-0.3
3,455,574	+				-0.7
3,455,574	+				+0.3
3,455,574	+				+1.6
3,455,574	+				-0.8
3,455,574	+				-1.2
3,455,574	+				-0.4
3,455,574	+				-2.1
3,455,575	-				-0.6
3,455,575	-				-0.0
3,455,575	-				+0.4
3,455,575	-				-0.6
3,455,586	+				+0.1
3,455,586	+				-1.6
3,455,586	+				+1.2
3,455,586	+				-0.3
3,455,587	-				-0.3
3,455,587	-				+0.1
3,455,587	-				+0.4
3,455,587	-				+1.5
3,455,587	-				+0.3
3,455,587	-				-1.2
3,455,587	-				+1.0
3,455,587	-				-0.1
3,455,587	-				+0.9
3,455,587	-				+1.3
3,455,587	-				+0.6
3,455,607	+				-2.2
3,455,607	+				+1.6
3,455,607	+				-0.1
3,455,607	+				-1.6
3,455,607	+				-0.5
3,455,607	+				-1.0
3,455,607	+				-0.9
3,455,607	+				+1.2
3,455,607	+				-1.7
3,455,607	+				-1.0
3,455,607	+				-1.8
3,455,608	-				+0.4
3,455,608	-				+1.0
3,455,608	-				+2.8
3,455,608	-				+0.2
3,455,630	-				+0.4
3,455,654	-				+1.7
3,455,667	+				-0.6
3,455,668	-				+1.1
3,455,714	+				-0.8
3,455,714	+				+0.0
3,455,714	+				-0.8
3,455,815	+				-0.2
3,455,864	+				+1.3
3,455,864	+				+0.7
3,455,864	+				+2.2
3,455,865	-				+0.9
3,455,865	-				+0.7
3,455,903	+		Psest_3289	0.15	+0.7
3,455,931	+		Psest_3289	0.22	+0.3
3,455,940	+		Psest_3289	0.24	-0.2
3,455,940	+		Psest_3289	0.24	+1.5
3,455,941	-		Psest_3289	0.24	+1.0
3,456,023	+		Psest_3289	0.43	-0.1
3,456,023	+		Psest_3289	0.43	+0.7
3,456,023	+		Psest_3289	0.43	+1.4
3,456,023	+		Psest_3289	0.43	-0.5
3,456,023	+		Psest_3289	0.43	+0.1
3,456,024	-		Psest_3289	0.43	-0.2
3,456,024	-		Psest_3289	0.43	+0.6
3,456,057	+		Psest_3289	0.51	+1.5
3,456,058	-		Psest_3289	0.51	-0.2
3,456,084	+		Psest_3289	0.57	-0.0
3,456,084	+		Psest_3289	0.57	+0.8
3,456,084	+		Psest_3289	0.57	+1.2
3,456,084	+		Psest_3289	0.57	+0.8
3,456,084	+		Psest_3289	0.57	+1.6
3,456,084	+		Psest_3289	0.57	+0.6
3,456,084	+		Psest_3289	0.57	+1.3
3,456,084	+		Psest_3289	0.57	+1.5
3,456,085	-		Psest_3289	0.58	-0.8
3,456,146	+		Psest_3289	0.72	+0.7
3,456,147	-		Psest_3289	0.72	-0.2
3,456,197	+		Psest_3289	0.84	+0.2
3,456,243	+				-1.8
3,456,243	+				+0.9
3,456,243	+				-0.1
3,456,243	+				+0.4
3,456,243	+				-0.8
3,456,244	-				-1.1
3,456,244	-				+1.5
3,456,244	-				+1.5
3,456,244	-				-0.1
3,456,265	-				+0.4
3,456,269	+				+1.0
3,456,269	+				-0.2
3,456,269	+				-0.2
3,456,269	+				-0.0
3,456,293	+				-0.2
3,456,315	+				+0.1
3,456,435	-		Psest_3290	0.24	-0.2
3,456,435	-		Psest_3290	0.24	+0.1
3,456,435	-		Psest_3290	0.24	+0.9
3,456,554	-		Psest_3290	0.53	+0.4
3,456,578	+		Psest_3290	0.58	-0.3
3,456,579	-		Psest_3290	0.59	+0.1
3,456,597	+		Psest_3290	0.63	-0.0
3,456,597	+		Psest_3290	0.63	-1.0
3,456,597	+		Psest_3290	0.63	-0.0
3,456,597	+		Psest_3290	0.63	-0.2
3,456,598	-		Psest_3290	0.63	+0.5
3,456,598	-		Psest_3290	0.63	+0.7
3,456,598	-		Psest_3290	0.63	+0.2
3,456,671	-		Psest_3290	0.81	+2.6
3,456,707	-		Psest_3290	0.89	+1.7
3,456,707	-		Psest_3290	0.89	+0.4
3,456,728	+				+0.1
3,456,729	-				+0.6
3,456,730	+				-0.4
3,456,901	+		Psest_3291	0.13	+0.8
3,456,902	-		Psest_3291	0.13	+0.0
3,456,910	+		Psest_3291	0.14	+1.5
3,456,999	-		Psest_3291	0.20	-1.2
3,457,025	-		Psest_3291	0.22	-0.8
3,457,191	+		Psest_3291	0.33	+1.9
3,457,191	+		Psest_3291	0.33	+0.1
3,457,196	-		Psest_3291	0.33	+1.2
3,457,196	-		Psest_3291	0.33	-0.9
3,457,196	-		Psest_3291	0.33	+1.6
3,457,243	-		Psest_3291	0.36	+1.2