Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_2082

Experiment: D-Gluconic Acid (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Gluconic Acid (C)
2,210,574	+		Psest_2080	0.83	-0.4
2,210,574	+		Psest_2080	0.83	-2.5
2,210,575	-		Psest_2080	0.83	-1.8
2,210,575	-		Psest_2080	0.83	-1.2
2,210,575	-		Psest_2080	0.83	+1.1
2,210,575	-		Psest_2080	0.83	+1.3
2,210,601	+		Psest_2080	0.88	-1.2
2,210,601	+		Psest_2080	0.88	-0.8
2,210,601	+		Psest_2080	0.88	+2.3
2,210,601	+		Psest_2080	0.88	-2.3
2,210,601	+		Psest_2080	0.88	-0.6
2,210,601	+		Psest_2080	0.88	-2.2
2,210,601	+		Psest_2080	0.88	-2.3
2,210,601	+		Psest_2080	0.88	+0.3
2,210,601	+		Psest_2080	0.88	-0.6
2,210,601	+		Psest_2080	0.88	-0.4
2,210,601	+		Psest_2080	0.88	+0.7
2,210,601	+		Psest_2080	0.88	+1.6
2,210,601	+		Psest_2080	0.88	-0.3
2,210,601	+		Psest_2080	0.88	+0.3
2,210,602	-		Psest_2080	0.88	+0.2
2,210,602	-		Psest_2080	0.88	+0.3
2,210,602	-		Psest_2080	0.88	+0.9
2,210,608	+		Psest_2080	0.89	-2.9
2,210,608	+		Psest_2080	0.89	-1.5
2,210,608	+		Psest_2080	0.89	+0.2
2,210,608	+		Psest_2080	0.89	-0.8
2,210,609	-		Psest_2080	0.89	+0.2
2,210,787	+				-1.2
2,210,787	+				-1.1
2,210,788	-				-2.4
2,210,789	+				-0.1
2,210,789	+				+0.7
2,210,790	-				+1.8
2,210,790	-				-1.6
2,210,793	+				-1.8
2,210,793	+				-1.0
2,210,793	+				-0.4
2,210,794	-				-0.9
2,210,794	-				-1.2
2,210,794	-				-0.6
2,210,813	+				+0.2
2,210,865	+		Psest_2081	0.16	+0.7
2,210,865	+		Psest_2081	0.16	+0.6
2,210,865	+		Psest_2081	0.16	-1.4
2,210,866	-		Psest_2081	0.16	-0.4
2,210,866	-		Psest_2081	0.16	+0.3
2,211,029	+		Psest_2081	0.37	-0.8
2,211,030	-		Psest_2081	0.37	-1.1
2,211,132	+		Psest_2081	0.51	+0.5
2,211,132	+		Psest_2081	0.51	-0.2
2,211,132	+		Psest_2081	0.51	-2.6
2,211,132	+		Psest_2081	0.51	-2.9
2,211,132	+		Psest_2081	0.51	+0.8
2,211,132	+		Psest_2081	0.51	-0.9
2,211,132	+		Psest_2081	0.51	-0.2
2,211,133	-		Psest_2081	0.51	-2.5
2,211,133	-		Psest_2081	0.51	-2.6
2,211,133	-		Psest_2081	0.51	+0.1
2,211,133	-		Psest_2081	0.51	+0.4
2,211,133	-		Psest_2081	0.51	+0.3
2,211,133	-		Psest_2081	0.51	-1.9
2,211,133	-		Psest_2081	0.51	+4.2
2,211,133	-		Psest_2081	0.51	-0.2
2,211,133	-		Psest_2081	0.51	+0.7
2,211,134	+		Psest_2081	0.51	+1.8
2,211,134	+		Psest_2081	0.51	+0.2
2,211,134	+		Psest_2081	0.51	-0.1
2,211,134	+		Psest_2081	0.51	+0.6
2,211,134	+		Psest_2081	0.51	-0.6
2,211,134	+		Psest_2081	0.51	-1.5
2,211,134	+		Psest_2081	0.51	+0.4
2,211,134	+		Psest_2081	0.51	-0.7
2,211,135	-		Psest_2081	0.51	+0.5
2,211,135	-		Psest_2081	0.51	+1.6
2,211,135	-		Psest_2081	0.51	+0.3
2,211,135	-		Psest_2081	0.51	+1.0
2,211,135	-		Psest_2081	0.51	+2.4
2,211,135	-		Psest_2081	0.51	+0.9
2,211,135	-		Psest_2081	0.51	-1.0
2,211,135	-		Psest_2081	0.51	+0.5
2,211,135	-		Psest_2081	0.51	-0.9
2,211,135	-		Psest_2081	0.51	+0.6
2,211,135	-		Psest_2081	0.51	+0.6
2,211,135	-		Psest_2081	0.51	+2.3
2,211,668	+				-0.5
2,211,668	+				-3.1
2,211,669	-				-0.2
2,211,678	-		Psest_2082	0.10	-2.3
2,211,680	+		Psest_2082	0.10	+0.0
2,211,680	+		Psest_2082	0.10	-2.1
2,211,681	-		Psest_2082	0.11	+0.0
2,211,719	+		Psest_2082	0.14	+0.9
2,211,719	+		Psest_2082	0.14	+0.3
2,211,720	-		Psest_2082	0.14	+0.6
2,211,725	+		Psest_2082	0.15	+1.3
2,211,725	+		Psest_2082	0.15	+1.8
2,211,726	-		Psest_2082	0.15	+0.5
2,211,726	-		Psest_2082	0.15	+1.3
2,211,726	-		Psest_2082	0.15	-2.2
2,211,726	-		Psest_2082	0.15	+0.0
2,211,728	+		Psest_2082	0.15	-0.7
2,211,728	+		Psest_2082	0.15	+2.6
2,211,771	-		Psest_2082	0.19	+0.8
2,211,774	-		Psest_2082	0.19	-0.1
2,212,095	-		Psest_2082	0.49	-0.2
2,212,130	+		Psest_2082	0.53	+0.6
2,212,131	+		Psest_2082	0.53	-0.0
2,212,200	+		Psest_2082	0.59	+0.6
2,212,261	+		Psest_2082	0.65	+1.8
2,212,261	+		Psest_2082	0.65	-1.3
2,212,262	-		Psest_2082	0.65	-0.1
2,212,304	+		Psest_2082	0.69	-1.8
2,212,304	+		Psest_2082	0.69	+0.7
2,212,304	+		Psest_2082	0.69	+1.0
2,212,304	+		Psest_2082	0.69	-1.5
2,212,304	+		Psest_2082	0.69	-1.9
2,212,304	+		Psest_2082	0.69	+0.1
2,212,304	+		Psest_2082	0.69	+1.1
2,212,305	-		Psest_2082	0.69	-0.7
2,212,305	-		Psest_2082	0.69	+1.2
2,212,318	+		Psest_2082	0.70	-1.4
2,212,318	+		Psest_2082	0.70	+0.9
2,212,318	+		Psest_2082	0.70	+0.7
2,212,319	-		Psest_2082	0.70	+1.0
2,212,319	-		Psest_2082	0.70	+0.1
2,212,341	-		Psest_2082	0.72	+0.9
2,212,346	+		Psest_2082	0.73	-0.8
2,212,346	+		Psest_2082	0.73	+5.0
2,212,346	+		Psest_2082	0.73	+0.6
2,212,346	+		Psest_2082	0.73	+0.2
2,212,347	-		Psest_2082	0.73	-0.3
2,212,475	+		Psest_2082	0.85	+2.2
2,212,487	+		Psest_2082	0.86	+0.5
2,212,487	+		Psest_2082	0.86	-0.9
2,212,487	+		Psest_2082	0.86	-0.3
2,212,565	+				+0.1
2,212,565	+				+1.2
2,212,566	-				+1.9
2,212,566	-				+0.4
2,212,566	-				+1.4
2,212,566	-				+1.0
2,212,566	-				+0.4
2,212,626	+				+0.5
2,212,652	+				-0.3
2,212,679	-				+1.7
2,212,683	+				-1.3
2,212,683	+				-0.4
2,212,683	+				-0.5
2,212,684	-				-0.9
2,212,684	-				+1.8
2,212,684	-				-1.9
2,212,684	-				+0.7
2,212,684	-				+1.0
2,212,684	-				-2.2
2,212,786	-				+0.4
2,213,047	+		Psest_2083	0.64	-0.6
2,213,048	-		Psest_2083	0.64	+0.0
2,213,048	-		Psest_2083	0.64	+0.6
2,213,048	-		Psest_2083	0.64	-1.9
2,213,048	-		Psest_2083	0.64	-1.7
2,213,050	+		Psest_2083	0.65	-1.7
2,213,050	+		Psest_2083	0.65	-0.5
2,213,050	+		Psest_2083	0.65	+0.6
2,213,050	+		Psest_2083	0.65	-2.3
2,213,051	-		Psest_2083	0.65	-0.1
2,213,051	-		Psest_2083	0.65	-0.4
2,213,051	-		Psest_2083	0.65	-0.2
2,213,223	+				-0.7
2,213,223	+				+1.7
2,213,223	+				-2.8
2,213,223	+				+0.2
2,213,223	+				-3.3
2,213,224	-				+0.8
2,213,224	-				+1.1
2,213,272	-				-1.5
2,213,272	-				-1.9
2,213,272	-				+0.6
2,213,390	-		Psest_2084	0.25	-0.6
2,213,555	+		Psest_2084	0.48	+1.7
2,213,555	+		Psest_2084	0.48	+0.2
2,213,555	+		Psest_2084	0.48	-2.0
2,213,555	+		Psest_2084	0.48	-0.9
2,213,556	-		Psest_2084	0.48	+1.1
2,213,556	-		Psest_2084	0.48	+1.5
2,213,556	-		Psest_2084	0.48	-0.3
2,213,556	-		Psest_2084	0.48	+0.0
2,213,556	-		Psest_2084	0.48	+0.5
2,213,556	-		Psest_2084	0.48	-2.3
2,213,607	+		Psest_2084	0.56	+0.9