Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_1124

Experiment: D-Gluconic Acid (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Gluconic Acid (C)
1,218,351	+		Psest_1123	0.57	+1.8
1,218,351	+		Psest_1123	0.57	-1.4
1,218,352	-		Psest_1123	0.57	+0.0
1,218,352	-		Psest_1123	0.57	-2.3
1,218,352	-		Psest_1123	0.57	+0.3
1,218,352	-		Psest_1123	0.57	+2.0
1,218,352	-		Psest_1123	0.57	+1.4
1,218,397	-		Psest_1123	0.60	+1.8
1,218,516	+		Psest_1123	0.69	-0.7
1,218,517	-		Psest_1123	0.69	-0.1
1,218,517	-		Psest_1123	0.69	-0.7
1,218,517	-		Psest_1123	0.69	-0.0
1,218,518	+		Psest_1123	0.69	+0.7
1,218,519	-		Psest_1123	0.69	+0.5
1,218,552	+		Psest_1123	0.71	-0.7
1,218,552	+		Psest_1123	0.71	+0.9
1,218,552	+		Psest_1123	0.71	+0.6
1,218,552	+		Psest_1123	0.71	+2.2
1,218,552	+		Psest_1123	0.71	+0.1
1,218,552	+		Psest_1123	0.71	-0.6
1,218,553	-		Psest_1123	0.71	+1.4
1,218,553	-		Psest_1123	0.71	+0.5
1,218,553	-		Psest_1123	0.71	+1.4
1,218,660	+		Psest_1123	0.79	-0.6
1,218,660	+		Psest_1123	0.79	-0.3
1,218,720	+		Psest_1123	0.84	+1.1
1,218,720	+		Psest_1123	0.84	-1.1
1,218,721	-		Psest_1123	0.84	+0.5
1,218,721	-		Psest_1123	0.84	+1.8
1,218,721	-		Psest_1123	0.84	+1.3
1,218,771	+		Psest_1123	0.87	+1.4
1,218,771	+		Psest_1123	0.87	+0.4
1,218,771	+		Psest_1123	0.87	+1.0
1,218,771	+		Psest_1123	0.87	+1.3
1,218,772	-		Psest_1123	0.88	+1.2
1,218,772	-		Psest_1123	0.88	-1.8
1,218,772	-		Psest_1123	0.88	+0.6
1,218,772	-		Psest_1123	0.88	+0.2
1,218,774	+		Psest_1123	0.88	+1.1
1,218,795	+		Psest_1123	0.89	+1.2
1,218,796	-		Psest_1123	0.89	+0.9
1,218,796	-		Psest_1123	0.89	+0.8
1,218,814	-				+0.2
1,218,814	-				+1.8
1,218,834	+				-0.1
1,218,834	+				+0.0
1,218,834	+				-1.3
1,218,834	+				-1.4
1,218,835	-				+3.2
1,218,836	+				+1.0
1,218,836	+				+1.0
1,218,836	+				-1.7
1,218,837	-				-0.7
1,218,848	+				+0.4
1,218,877	-				+1.8
1,218,944	+				-0.7
1,218,944	+				-0.8
1,218,944	+				-0.6
1,218,944	+				-3.7
1,218,944	+				-0.4
1,218,945	-				+1.5
1,218,945	-				+1.1
1,218,945	-				+0.6
1,218,965	+				-1.2
1,218,965	+				-0.4
1,219,015	+				-0.6
1,219,015	+				-2.7
1,219,015	+				-1.1
1,219,016	-				-1.4
1,219,056	-				+0.9
1,219,077	+				-3.5
1,219,078	-				+0.9
1,219,176	-				+0.1
1,219,176	-				-1.1
1,219,411	+				+1.0
1,219,412	-				+0.7
1,219,434	+				+1.8
1,219,435	-				-0.2
1,219,435	-				-2.0
1,219,435	-				+1.0
1,219,435	-				+0.7
1,219,466	+		Psest_1124	0.10	-0.8
1,219,629	+		Psest_1124	0.17	+0.3
1,219,629	+		Psest_1124	0.17	-3.0
1,219,629	+		Psest_1124	0.17	+2.1
1,219,630	-		Psest_1124	0.17	+2.1
1,219,630	-		Psest_1124	0.17	+0.1
1,219,630	-		Psest_1124	0.17	+2.5
1,219,795	+		Psest_1124	0.23	+3.2
1,219,795	+		Psest_1124	0.23	+0.9
1,219,796	-		Psest_1124	0.23	-0.1
1,219,796	-		Psest_1124	0.23	-0.1
1,219,796	-		Psest_1124	0.23	-0.7
1,219,796	-		Psest_1124	0.23	-0.9
1,219,796	-		Psest_1124	0.23	+0.2
1,219,934	+		Psest_1124	0.28	+0.4
1,219,934	+		Psest_1124	0.28	+1.2
1,219,934	+		Psest_1124	0.28	+1.2
1,219,934	+		Psest_1124	0.28	+1.2
1,219,935	-		Psest_1124	0.28	-0.9
1,219,935	-		Psest_1124	0.28	+0.2
1,219,935	-		Psest_1124	0.28	+2.0
1,219,935	-		Psest_1124	0.28	+1.5
1,219,935	-		Psest_1124	0.28	+0.1
1,219,935	-		Psest_1124	0.28	+2.0
1,220,037	+		Psest_1124	0.32	+1.5
1,220,037	+		Psest_1124	0.32	-0.3
1,220,037	+		Psest_1124	0.32	+1.6
1,220,037	+		Psest_1124	0.32	-0.3
1,220,037	+		Psest_1124	0.32	+1.0
1,220,037	+		Psest_1124	0.32	+1.1
1,220,037	+		Psest_1124	0.32	-0.7
1,220,038	-		Psest_1124	0.32	-2.2
1,220,038	-		Psest_1124	0.32	-0.3
1,220,038	-		Psest_1124	0.32	+0.6
1,220,038	-		Psest_1124	0.32	-0.7
1,220,107	+		Psest_1124	0.35	+1.4
1,220,190	+		Psest_1124	0.38	+0.3
1,220,191	-		Psest_1124	0.38	+3.0
1,220,191	-		Psest_1124	0.38	+0.5
1,220,288	+		Psest_1124	0.42	+0.7
1,220,288	+		Psest_1124	0.42	+0.7
1,220,289	-		Psest_1124	0.42	+1.4
1,220,289	-		Psest_1124	0.42	-2.0
1,220,289	-		Psest_1124	0.42	+0.5
1,220,289	-		Psest_1124	0.42	-1.1
1,220,389	+		Psest_1124	0.45	+0.7
1,220,389	+		Psest_1124	0.45	+0.6
1,220,390	-		Psest_1124	0.46	-0.7
1,220,642	+		Psest_1124	0.55	+0.3
1,220,643	-		Psest_1124	0.55	+1.3
1,220,699	+		Psest_1124	0.57	+0.1
1,220,699	+		Psest_1124	0.57	+0.2
1,220,699	+		Psest_1124	0.57	+0.2
1,220,699	+		Psest_1124	0.57	-1.6
1,220,699	+		Psest_1124	0.57	+0.6
1,220,699	+		Psest_1124	0.57	-0.9
1,220,699	+		Psest_1124	0.57	-0.3
1,220,700	-		Psest_1124	0.57	+1.3
1,220,700	-		Psest_1124	0.57	+1.8
1,220,700	-		Psest_1124	0.57	+0.9
1,220,747	+		Psest_1124	0.59	-2.1
1,220,747	+		Psest_1124	0.59	+1.4
1,220,747	+		Psest_1124	0.59	+0.6
1,220,864	-		Psest_1124	0.64	+0.4
1,220,873	-		Psest_1124	0.64	-0.7
1,220,873	-		Psest_1124	0.64	-1.7
1,220,875	-		Psest_1124	0.64	+1.1
1,220,912	+		Psest_1124	0.65	+1.3
1,220,912	+		Psest_1124	0.65	-0.2
1,220,912	+		Psest_1124	0.65	+0.3
1,220,913	-		Psest_1124	0.65	-1.1
1,220,945	+		Psest_1124	0.67	-0.2
1,220,945	+		Psest_1124	0.67	+1.9
1,220,987	+		Psest_1124	0.68	-1.8
1,220,988	-		Psest_1124	0.68	+1.9
1,220,988	-		Psest_1124	0.68	-0.3
1,221,003	-		Psest_1124	0.69	+0.1
1,221,053	+		Psest_1124	0.71	-2.2
1,221,209	+		Psest_1124	0.77	-0.3
1,221,209	+		Psest_1124	0.77	+1.0
1,221,209	+		Psest_1124	0.77	+1.3
1,221,209	+		Psest_1124	0.77	-2.3
1,221,210	-		Psest_1124	0.77	+1.2
1,221,210	-		Psest_1124	0.77	+0.2
1,221,210	-		Psest_1124	0.77	+0.1
1,221,210	-		Psest_1124	0.77	-1.3
1,221,210	-		Psest_1124	0.77	+0.9
1,221,210	-		Psest_1124	0.77	-2.6
1,221,210	-		Psest_1124	0.77	+0.8
1,221,210	-		Psest_1124	0.77	+2.7
1,221,245	+		Psest_1124	0.78	+0.3
1,221,245	+		Psest_1124	0.78	+0.9
1,221,246	-		Psest_1124	0.78	+0.2
1,221,246	-		Psest_1124	0.78	+1.4
1,221,256	-		Psest_1124	0.79	-0.1
1,221,273	-		Psest_1124	0.79	+1.5
1,221,486	+		Psest_1124	0.87	-1.3
1,221,487	-		Psest_1124	0.87	+1.7
1,221,487	-		Psest_1124	0.87	+0.7
1,221,497	+		Psest_1124	0.88	-1.1
1,221,497	+		Psest_1124	0.88	+0.0
1,221,497	+		Psest_1124	0.88	+0.5
1,221,497	+		Psest_1124	0.88	+0.2
1,221,497	+		Psest_1124	0.88	+1.5
1,221,497	+		Psest_1124	0.88	+1.2
1,221,498	-		Psest_1124	0.88	+1.3
1,221,498	-		Psest_1124	0.88	-0.8
1,221,498	-		Psest_1124	0.88	+0.3
1,221,498	-		Psest_1124	0.88	-1.3
1,221,498	-		Psest_1124	0.88	+2.3
1,221,498	-		Psest_1124	0.88	-0.7
1,221,498	-		Psest_1124	0.88	+0.5
1,221,498	-		Psest_1124	0.88	-1.0
1,221,711	+				-0.7
1,221,711	+				+0.0
1,221,711	+				+1.9
1,221,711	+				+0.4
1,221,711	+				-0.9
1,221,711	+				+0.7
1,221,711	+				+0.7
1,221,712	-				+1.4
1,221,712	-				+2.1
1,221,712	-				+1.1
1,221,712	-				+1.0
1,221,721	+				+0.3
1,221,721	+				+1.3
1,221,722	-				+0.6
1,221,754	+				-1.0
1,221,755	-				+0.0
1,221,755	-				+0.8
1,221,862	-				+2.0
1,221,992	+				-0.5
1,221,992	+				+0.8
1,221,992	+				+0.1
1,222,125	+		Psest_1125	0.50	-1.7
1,222,126	-		Psest_1125	0.51	-2.0
1,222,127	+		Psest_1125	0.51	-1.3
1,222,127	+		Psest_1125	0.51	-2.2
1,222,128	-		Psest_1125	0.51	-1.1
1,222,128	-		Psest_1125	0.51	-0.8
1,222,211	+		Psest_1125	0.82	+1.1
1,222,211	+		Psest_1125	0.82	-0.4
1,222,212	-		Psest_1125	0.83	-2.3
1,222,265	+				-0.0
1,222,365	+				-1.0
1,222,366	-				-0.1
1,222,366	-				-0.1
1,222,455	+		Psest_1126	0.31	-2.9
1,222,457	+		Psest_1126	0.32	-2.5
1,222,457	+		Psest_1126	0.32	-0.5
1,222,457	+		Psest_1126	0.32	-0.9
1,222,457	+		Psest_1126	0.32	-1.4
1,222,457	+		Psest_1126	0.32	-2.7
1,222,457	+		Psest_1126	0.32	+0.6
1,222,457	+		Psest_1126	0.32	+2.2
1,222,457	+		Psest_1126	0.32	+1.9
1,222,457	+		Psest_1126	0.32	+0.1
1,222,457	+		Psest_1126	0.32	+2.0
1,222,458	-		Psest_1126	0.33	-0.4
1,222,458	-		Psest_1126	0.33	+0.6
1,222,458	-		Psest_1126	0.33	-2.5
1,222,458	-		Psest_1126	0.33	+0.1
1,222,458	-		Psest_1126	0.33	-3.2
1,222,458	-		Psest_1126	0.33	-0.0
1,222,458	-		Psest_1126	0.33	-1.5
1,222,458	-		Psest_1126	0.33	+0.5
1,222,458	-		Psest_1126	0.33	-2.1
1,222,458	-		Psest_1126	0.33	+1.5
1,222,458	-		Psest_1126	0.33	-3.6
1,222,458	-		Psest_1126	0.33	+0.1
1,222,610	+				+0.7
1,222,631	+				+2.1
1,222,631	+				-0.8
1,222,631	+				+0.2
1,222,631	+				+0.8
1,222,631	+				+0.3
1,222,632	-				-0.2
1,222,632	-				+0.2
1,222,632	-				+0.5
1,222,678	-				-0.4
1,222,700	+				-0.8
1,222,714	-				-2.7
1,222,714	-				-0.4