Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_0139

Experiment: a-Ketoglutaric (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	a-Ketoglutaric (C)
136,979	+		Psest_0137	0.76	-1.7
136,979	+		Psest_0137	0.76	-1.4
136,979	+		Psest_0137	0.76	-1.0
136,979	+		Psest_0137	0.76	-0.5
136,979	+		Psest_0137	0.76	+0.8
136,979	+		Psest_0137	0.76	-1.0
136,979	+		Psest_0137	0.76	-1.7
136,979	+		Psest_0137	0.76	-1.8
136,980	-		Psest_0137	0.77	-1.2
136,980	-		Psest_0137	0.77	-2.5
136,983	+		Psest_0137	0.77	+0.1
137,009	+		Psest_0137	0.81	-1.5
137,010	-		Psest_0137	0.81	-1.2
137,142	+				-0.7
137,142	+				+0.2
137,143	-				-0.5
137,143	-				+0.3
137,143	-				-0.0
137,211	+				-1.3
137,211	+				-1.1
137,212	-				+0.2
137,212	-				+0.6
137,229	+				-1.3
137,229	+				-1.8
137,229	+				-0.9
137,229	+				-0.1
137,229	+				-0.8
137,229	+				-1.9
137,229	+				-1.5
137,230	-				-2.5
137,230	-				-0.8
137,230	-				-0.5
137,230	-				-2.1
137,230	-				-0.7
137,230	-				+0.6
137,230	-				+0.7
137,230	-				-0.7
137,230	-				-0.2
137,230	-				-0.5
137,230	-				-0.9
137,250	+				-0.0
137,250	+				+0.1
137,250	+				-3.2
137,250	+				-1.5
137,250	+				-2.5
137,250	+				-0.8
137,250	+				-3.4
137,251	-				-0.5
137,251	-				-0.5
137,251	-				-3.3
137,251	-				-1.8
137,251	-				-1.1
137,251	-				-1.2
137,251	-				-1.5
137,251	-				-0.6
137,251	-				+0.6
137,251	-				-0.2
137,251	-				+0.2
137,251	-				-2.5
137,251	-				-1.5
137,251	-				+1.5
137,251	-				-0.5
137,251	-				-1.8
137,464	-		Psest_0138	0.34	-2.3
137,485	-		Psest_0138	0.37	-1.0
137,577	+		Psest_0138	0.49	-0.9
137,637	+		Psest_0138	0.57	-1.6
137,637	+		Psest_0138	0.57	-1.9
137,637	+		Psest_0138	0.57	+0.2
137,637	+		Psest_0138	0.57	-1.9
137,637	+		Psest_0138	0.57	-2.1
137,637	+		Psest_0138	0.57	-2.2
137,637	+		Psest_0138	0.57	-3.3
137,637	+		Psest_0138	0.57	-1.6
137,638	-		Psest_0138	0.57	-2.3
137,638	-		Psest_0138	0.57	-1.6
137,638	-		Psest_0138	0.57	-0.9
137,638	-		Psest_0138	0.57	+0.5
137,638	-		Psest_0138	0.57	-1.6
137,638	-		Psest_0138	0.57	-0.9
137,638	-		Psest_0138	0.57	-0.7
137,638	-		Psest_0138	0.57	-0.7
137,640	+		Psest_0138	0.57	-2.1
137,640	+		Psest_0138	0.57	-0.8
137,640	+		Psest_0138	0.57	-1.4
137,641	-		Psest_0138	0.57	-1.7
137,641	-		Psest_0138	0.57	-1.9
137,641	-		Psest_0138	0.57	-1.7
137,641	-		Psest_0138	0.57	-0.8
137,641	-		Psest_0138	0.57	-1.6
137,641	-		Psest_0138	0.57	-0.6
137,803	+		Psest_0138	0.79	-1.7
137,804	-		Psest_0138	0.79	-1.9
137,882	+		Psest_0138	0.89	+1.1
137,950	+				-1.9
137,950	+				-1.6
137,950	+				-1.7
137,950	+				-0.1
137,950	+				-2.1
137,950	+				-1.0
137,950	+				-0.4
137,950	+				-1.4
137,951	-				+0.4
137,951	-				-0.9
137,951	-				-1.7
137,951	-				-0.0
137,951	-				-1.8
137,951	-				-1.2
137,951	-				-0.9
137,951	-				-0.1
137,951	-				+2.2
137,952	+				-1.9
137,952	+				-2.0
137,952	+				-1.5
137,952	+				-0.4
137,952	+				-3.3
137,952	+				+0.9
137,952	+				-1.6
137,952	+				-0.7
137,952	+				-0.9
137,952	+				-3.3
137,952	+				-2.7
137,952	+				-0.2
137,952	+				-0.8
137,953	-				-0.6
137,953	-				-2.4
137,953	-				-0.3
137,953	-				-0.4
137,953	-				-1.5
137,953	-				-0.2
137,953	-				-1.4
137,953	-				+0.0
137,953	-				-1.2
137,953	-				-2.8
137,953	-				-0.4
137,953	-				-1.7
137,953	-				-0.9
137,979	+				-0.5
137,980	-				-0.3
138,004	+				-1.5
138,005	-				-0.7
138,032	+				-1.4
138,032	+				-0.8
138,032	+				-1.5
138,033	-				-0.5
138,033	-				+0.2
138,033	-				-0.9
138,095	+		Psest_0139	0.15	-0.6
138,096	-		Psest_0139	0.15	-2.2
138,136	+		Psest_0139	0.20	-1.3
138,136	+		Psest_0139	0.20	-2.5
138,136	+		Psest_0139	0.20	-1.1
138,137	-		Psest_0139	0.21	-1.0
138,595	+		Psest_0139	0.80	-0.3
138,595	+		Psest_0139	0.80	-1.8
138,595	+		Psest_0139	0.80	-1.9
138,595	+		Psest_0139	0.80	-1.2
138,596	-		Psest_0139	0.80	-0.7
138,596	-		Psest_0139	0.80	-1.0
138,764	+				-1.1
138,764	+				+0.4
138,765	-				-1.3
138,791	+				+0.2
138,791	+				-1.1
138,791	+				-1.2
138,791	+				-0.4
138,791	+				+0.5
138,791	+				-2.6
138,791	+				-1.0
138,791	+				-2.0
138,791	+				-0.4
138,792	-				-0.4
138,792	-				+1.5
138,792	-				+0.6
138,792	-				+0.3
138,792	-				-1.1
138,792	-				+1.3
138,792	-				-0.3
138,795	+				-1.6
138,795	+				-2.0
138,795	+				-2.0
138,795	+				-3.6
138,795	+				-1.4
138,796	-				+1.2
138,796	-				-0.2
138,796	-				+0.6
138,849	+				-0.7
138,849	+				-0.2
138,850	-				+0.7
138,850	-				+0.2
138,850	-				+0.6
138,850	-				-0.2
138,850	-				+0.9
138,943	+				-0.1
138,943	+				+0.1
138,943	+				-0.7
138,943	+				-1.0
138,943	+				+0.9
138,944	-				+0.3
138,944	-				+0.2
138,944	-				+0.2
138,944	-				-0.1
138,944	-				+0.0
138,945	+				+0.0
138,945	+				+1.1
138,945	+				-0.3
138,945	+				-0.3
138,945	+				-0.5
138,945	+				-0.6
138,945	+				-0.3
138,945	+				-1.6
138,945	+				+0.3
138,945	+				+0.1
138,945	+				-0.5
138,945	+				-0.1
138,945	+				+0.2
138,946	-				-0.8
138,946	-				-0.9
138,946	-				-0.8
138,946	-				-1.4
138,946	-				+0.5
138,946	-				+0.2
138,946	-				-1.2
138,946	-				-2.8
138,946	-				-1.5
138,946	-				-0.5
138,946	-				+0.1
138,946	-				-0.7
138,946	-				+0.7
138,946	-				-0.6
138,946	-				-0.1
138,946	-				+0.2
138,946	-				+1.0
139,146	+				+1.1
139,146	+				+1.1
139,146	+				+0.4
139,146	+				-0.3
139,146	+				-0.4
139,146	+				+0.4
139,146	+				-0.5
139,147	-				-0.5
139,147	-				-0.6
139,147	-				+0.1
139,147	-				+0.4
139,147	-				-0.9
139,147	-				-1.5
139,147	-				+0.6
139,147	-				+0.8
139,166	+				-1.0
139,166	+				-0.2
139,166	+				+0.8
139,166	+				-0.9
139,166	+				-0.2
139,167	-				+0.2
139,167	-				-0.1
139,167	-				-0.1
139,167	-				-0.9
139,167	-				-1.5
139,167	-				-0.0
139,167	-				-0.3
139,167	-				+1.2
139,167	-				+0.8
139,200	+				+0.0
139,200	+				-0.8
139,201	-				+0.1
139,209	+				-0.1
139,209	+				-0.5
139,209	+				-0.0
139,249	-		Psest_0140	0.10	-0.2
139,251	+		Psest_0140	0.10	+0.4
139,251	+		Psest_0140	0.10	+1.6
139,251	+		Psest_0140	0.10	-0.6
139,251	+		Psest_0140	0.10	-1.1
139,252	-		Psest_0140	0.10	-0.2
139,252	-		Psest_0140	0.10	+0.1
139,252	-		Psest_0140	0.10	+1.5
139,252	-		Psest_0140	0.10	+0.2
139,252	-		Psest_0140	0.10	+1.2
139,252	-		Psest_0140	0.10	-0.3
139,252	-		Psest_0140	0.10	+1.9
139,323	+		Psest_0140	0.14	+0.6