Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_0981

Experiment: D-Maltose (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntPsest_0980 and Psest_0981 are separated by 28 nucleotidesPsest_0981 and Psest_0982 are separated by 102 nucleotidesPsest_0982 and Psest_0983 are separated by 2 nucleotides Psest_0980: Psest_0980 - transcription termination factor NusA/transcription termination factor NusA, C-terminal duplication, at 1,061,181 to 1,062,662 _0980 Psest_0981: Psest_0981 - translation initiation factor IF-2, at 1,062,691 to 1,065,192 _0981 Psest_0982: Psest_0982 - ribosome-binding factor A, at 1,065,295 to 1,065,684 _0982 Psest_0983: Psest_0983 - tRNA pseudouridine 55 synthase, at 1,065,687 to 1,066,604 _0983 Position (kb) 1062 1063 1064 1065 1066Strain fitness (log2 ratio) -1 0 1at 1062.660 kb on + strandat 1062.660 kb on + strandat 1062.664 kb on + strandat 1062.664 kb on + strandat 1062.664 kb on + strandat 1065.190 kb on + strandat 1065.278 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction D-Maltose (C)
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1,062,660 + -0.1
1,062,660 + +0.0
1,062,664 + -1.3
1,062,664 + -1.4
1,062,664 + -0.3
1,065,190 + +0.1
1,065,278 + +0.4

Or see this region's nucleotide sequence