Experiment: D-Maltose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_0977 and Psest_0978 are separated by 96 nucleotides Psest_0978 and Psest_0979 are separated by 127 nucleotides Psest_0979 and Psest_0980 are separated by 47 nucleotides Psest_0980 and Psest_0981 are separated by 28 nucleotides
Psest_0977: Psest_0977 - tRNA_Leu_GAG, at 1,060,289 to 1,060,374
_0977
Psest_0978: Psest_0978 - tRNA_Met_CAT, at 1,060,471 to 1,060,547
_0978
Psest_0979: Psest_0979 - Uncharacterized protein conserved in bacteria, at 1,060,675 to 1,061,133
_0979
Psest_0980: Psest_0980 - transcription termination factor NusA/transcription termination factor NusA, C-terminal duplication, at 1,061,181 to 1,062,662
_0980
Psest_0981: Psest_0981 - translation initiation factor IF-2, at 1,062,691 to 1,065,192
_0981
Position (kb)
1061
1062
1063 Strain fitness (log2 ratio)
-2
-1
0
1 at 1060.391 kb on + strand at 1060.391 kb on + strand at 1060.391 kb on + strand at 1060.422 kb on + strand at 1060.566 kb on + strand at 1060.579 kb on + strand at 1060.579 kb on + strand at 1060.652 kb on + strand at 1060.652 kb on + strand at 1060.652 kb on + strand at 1060.652 kb on + strand at 1060.652 kb on + strand at 1060.652 kb on + strand at 1060.652 kb on + strand at 1062.660 kb on + strand at 1062.660 kb on + strand at 1062.664 kb on + strand at 1062.664 kb on + strand at 1062.664 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction D-Maltose (C) remove 1,060,391 + +0.9 1,060,391 + +0.5 1,060,391 + +0.7 1,060,422 + +0.2 1,060,566 + -1.3 1,060,579 + +0.8 1,060,579 + -0.1 1,060,652 + -0.7 1,060,652 + +0.5 1,060,652 + -1.8 1,060,652 + -0.8 1,060,652 + -1.1 1,060,652 + -0.8 1,060,652 + -2.5 1,062,660 + -0.1 1,062,660 + +0.0 1,062,664 + -1.3 1,062,664 + -1.4 1,062,664 + -0.3
Or see this region's nucleotide sequence