Experiment: D-Maltose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_0962 and Psest_0963 are separated by 203 nucleotides Psest_0963 and Psest_0964 are separated by 99 nucleotides Psest_0964 and Psest_0965 are separated by 122 nucleotides
Psest_0962: Psest_0962 - DNA repair protein RecN, at 1,041,809 to 1,043,482
_0962
Psest_0963: Psest_0963 - Molecular chaperone GrpE (heat shock protein), at 1,043,686 to 1,044,255
_0963
Psest_0964: Psest_0964 - chaperone protein DnaK, at 1,044,355 to 1,046,268
_0964
Psest_0965: Psest_0965 - chaperone protein DnaJ, at 1,046,391 to 1,047,521
_0965
Position (kb)
1044
1045
1046
1047 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 1043.454 kb on + strand at 1043.455 kb on - strand at 1043.497 kb on + strand at 1043.518 kb on - strand at 1043.520 kb on - strand at 1043.541 kb on - strand at 1043.541 kb on - strand at 1043.633 kb on + strand at 1043.633 kb on + strand at 1043.633 kb on + strand at 1043.633 kb on + strand at 1043.633 kb on + strand at 1043.669 kb on + strand at 1043.671 kb on + strand at 1046.161 kb on + strand at 1046.161 kb on + strand at 1046.161 kb on + strand at 1046.161 kb on + strand at 1046.266 kb on + strand at 1046.266 kb on + strand at 1046.266 kb on + strand at 1046.266 kb on + strand at 1046.266 kb on + strand at 1046.266 kb on + strand at 1046.266 kb on + strand at 1046.266 kb on + strand at 1046.386 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction D-Maltose (C) remove 1,043,454 + -2.6 1,043,455 - +0.3 1,043,497 + +1.7 1,043,518 - +0.5 1,043,520 - +0.2 1,043,541 - -0.2 1,043,541 - +0.9 1,043,633 + -0.2 1,043,633 + -0.7 1,043,633 + -0.7 1,043,633 + +0.0 1,043,633 + -2.8 1,043,669 + +0.5 1,043,671 + +0.6 1,046,161 + -0.5 1,046,161 + -0.0 1,046,161 + -0.2 1,046,161 + +0.1 1,046,266 + -1.8 1,046,266 + +0.5 1,046,266 + -0.5 1,046,266 + -0.3 1,046,266 + +1.1 1,046,266 + -0.4 1,046,266 + -0.9 1,046,266 + -1.1 1,046,386 + +0.1
Or see this region's nucleotide sequence