Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_0946

Experiment: D-Maltose (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntPsest_0945 and Psest_0946 overlap by 8 nucleotides Psest_0945: Psest_0945 - chromate transporter, chromate ion transporter (CHR) family, at 1,021,858 to 1,023,219 _0945 Psest_0946: Psest_0946 - Uncharacterized conserved protein, at 1,023,212 to 1,024,156 _0946 Position (kb) 1023 1024 1025Strain fitness (log2 ratio) -3 -2 -1 0 1 2at 1024.488 kb on + strandat 1024.488 kb on + strandat 1024.488 kb on + strandat 1024.488 kb on + strandat 1024.509 kb on + strandat 1024.571 kb on + strandat 1024.571 kb on + strandat 1024.583 kb on + strandat 1024.584 kb on - strandat 1024.659 kb on + strandat 1024.659 kb on + strandat 1024.660 kb on - strandat 1024.660 kb on - strandat 1024.672 kb on + strandat 1024.672 kb on + strandat 1024.672 kb on + strandat 1024.672 kb on + strandat 1024.672 kb on + strandat 1024.672 kb on + strandat 1024.672 kb on + strandat 1024.672 kb on + strandat 1024.672 kb on + strandat 1024.672 kb on + strandat 1024.672 kb on + strandat 1024.672 kb on + strandat 1024.672 kb on + strandat 1024.672 kb on + strandat 1024.673 kb on - strandat 1024.673 kb on - strandat 1024.673 kb on - strandat 1024.673 kb on - strandat 1024.673 kb on - strandat 1024.673 kb on - strandat 1024.724 kb on + strandat 1024.725 kb on - strandat 1024.725 kb on - strandat 1024.798 kb on + strandat 1024.799 kb on - strandat 1024.799 kb on - strandat 1024.799 kb on - strandat 1024.825 kb on - strandat 1024.825 kb on - strandat 1024.905 kb on - strandat 1024.971 kb on + strandat 1025.005 kb on + strandat 1025.005 kb on + strandat 1025.006 kb on - strandat 1025.006 kb on - strandat 1025.006 kb on - strandat 1025.006 kb on - strandat 1025.006 kb on - strandat 1025.034 kb on + strandat 1025.034 kb on + strandat 1025.035 kb on - strandat 1025.152 kb on + strandat 1025.153 kb on - strandat 1025.153 kb on - strandat 1025.153 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction D-Maltose (C)
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1,024,488 + -3.1
1,024,488 + -0.0
1,024,488 + +0.3
1,024,488 + +2.4
1,024,509 + +0.7
1,024,571 + -0.5
1,024,571 + -0.0
1,024,583 + -0.8
1,024,584 - -0.0
1,024,659 + +0.5
1,024,659 + -1.3
1,024,660 - -1.7
1,024,660 - -2.6
1,024,672 + -0.8
1,024,672 + -1.2
1,024,672 + -0.3
1,024,672 + -1.8
1,024,672 + +0.5
1,024,672 + +0.1
1,024,672 + -0.7
1,024,672 + -0.4
1,024,672 + +0.6
1,024,672 + -0.0
1,024,672 + -0.8
1,024,672 + -0.0
1,024,672 + +2.3
1,024,672 + -1.3
1,024,673 - +0.3
1,024,673 - -1.0
1,024,673 - +0.4
1,024,673 - +0.3
1,024,673 - +1.4
1,024,673 - +0.8
1,024,724 + +0.4
1,024,725 - +0.2
1,024,725 - -0.0
1,024,798 + -0.2
1,024,799 - +0.3
1,024,799 - -0.1
1,024,799 - -0.4
1,024,825 - -1.8
1,024,825 - -0.8
1,024,905 - -0.9
1,024,971 + +1.0
1,025,005 + +0.2
1,025,005 + +0.7
1,025,006 - -0.1
1,025,006 - +1.0
1,025,006 - -0.1
1,025,006 - +0.6
1,025,006 - -0.4
1,025,034 + -0.0
1,025,034 + -0.5
1,025,035 - +1.1
1,025,152 + +0.5
1,025,153 - -0.2
1,025,153 - -2.2
1,025,153 - -0.3

Or see this region's nucleotide sequence