Experiment: D-Maltose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_0693 and Psest_0694 are separated by 180 nucleotides Psest_0694 and Psest_0695 are separated by 28 nucleotides Psest_0695 and Psest_0696 are separated by 34 nucleotides
Psest_0693: Psest_0693 - His Kinase A (phosphoacceptor) domain./PAS fold./Response regulator receiver domain./Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase., at 757,393 to 759,555
_0693
Psest_0694: Psest_0694 - ribosomal protein S6, at 759,736 to 760,152
_0694
Psest_0695: Psest_0695 - ribosomal protein S18, at 760,181 to 760,411
_0695
Psest_0696: Psest_0696 - hypothetical protein, at 760,446 to 761,339
_0696
Position (kb) 759
760
761 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 758.860 kb on + strand, within Psest_0693 at 758.860 kb on + strand, within Psest_0693 at 758.860 kb on + strand, within Psest_0693 at 758.860 kb on + strand, within Psest_0693 at 758.861 kb on - strand, within Psest_0693 at 758.861 kb on - strand, within Psest_0693 at 758.861 kb on - strand, within Psest_0693 at 758.861 kb on - strand, within Psest_0693 at 758.861 kb on - strand, within Psest_0693 at 758.861 kb on - strand, within Psest_0693 at 758.861 kb on - strand, within Psest_0693 at 758.861 kb on - strand, within Psest_0693 at 758.861 kb on - strand, within Psest_0693 at 758.861 kb on - strand, within Psest_0693 at 758.986 kb on + strand, within Psest_0693 at 758.987 kb on - strand, within Psest_0693 at 758.987 kb on - strand, within Psest_0693 at 759.077 kb on + strand, within Psest_0693 at 759.077 kb on + strand, within Psest_0693 at 759.077 kb on + strand, within Psest_0693 at 759.077 kb on + strand, within Psest_0693 at 759.078 kb on - strand, within Psest_0693 at 759.078 kb on - strand, within Psest_0693 at 759.078 kb on - strand, within Psest_0693 at 759.078 kb on - strand, within Psest_0693 at 759.078 kb on - strand, within Psest_0693 at 759.078 kb on - strand, within Psest_0693 at 759.078 kb on - strand, within Psest_0693 at 759.078 kb on - strand, within Psest_0693 at 759.078 kb on - strand, within Psest_0693 at 759.078 kb on - strand, within Psest_0693 at 759.078 kb on - strand, within Psest_0693 at 759.329 kb on + strand, within Psest_0693 at 759.329 kb on + strand, within Psest_0693 at 759.329 kb on + strand, within Psest_0693 at 759.329 kb on + strand, within Psest_0693 at 759.329 kb on + strand, within Psest_0693 at 759.329 kb on + strand, within Psest_0693 at 759.329 kb on + strand, within Psest_0693 at 759.330 kb on - strand, within Psest_0693 at 759.330 kb on - strand, within Psest_0693 at 759.330 kb on - strand, within Psest_0693 at 759.330 kb on - strand, within Psest_0693 at 759.330 kb on - strand, within Psest_0693 at 759.330 kb on - strand, within Psest_0693 at 759.330 kb on - strand, within Psest_0693 at 759.330 kb on - strand, within Psest_0693 at 759.330 kb on - strand, within Psest_0693 at 759.330 kb on - strand, within Psest_0693 at 759.330 kb on - strand, within Psest_0693 at 759.487 kb on + strand at 759.487 kb on + strand at 759.488 kb on - strand at 759.549 kb on + strand at 759.549 kb on + strand at 759.549 kb on + strand at 759.550 kb on - strand at 759.556 kb on + strand at 759.556 kb on + strand at 759.615 kb on + strand at 759.615 kb on + strand at 759.615 kb on + strand at 759.615 kb on + strand at 760.729 kb on + strand, within Psest_0696 at 760.729 kb on + strand, within Psest_0696 at 760.729 kb on + strand, within Psest_0696 at 760.730 kb on - strand, within Psest_0696 at 760.755 kb on + strand, within Psest_0696 at 760.755 kb on + strand, within Psest_0696 at 760.755 kb on + strand, within Psest_0696 at 760.755 kb on + strand, within Psest_0696 at 760.755 kb on + strand, within Psest_0696 at 760.755 kb on + strand, within Psest_0696 at 760.755 kb on + strand, within Psest_0696 at 760.755 kb on + strand, within Psest_0696 at 760.755 kb on + strand, within Psest_0696 at 760.755 kb on + strand, within Psest_0696 at 760.756 kb on - strand, within Psest_0696 at 760.986 kb on + strand, within Psest_0696 at 760.987 kb on - strand, within Psest_0696 at 761.131 kb on + strand, within Psest_0696
Per-strain Table
Position Strand Gene LocusTag Fraction D-Maltose (C) remove 758,860 + Psest_0693 0.68 +0.2 758,860 + Psest_0693 0.68 -1.5 758,860 + Psest_0693 0.68 +0.4 758,860 + Psest_0693 0.68 +0.5 758,861 - Psest_0693 0.68 -1.3 758,861 - Psest_0693 0.68 -1.2 758,861 - Psest_0693 0.68 -1.7 758,861 - Psest_0693 0.68 +0.4 758,861 - Psest_0693 0.68 -1.7 758,861 - Psest_0693 0.68 -1.4 758,861 - Psest_0693 0.68 -0.4 758,861 - Psest_0693 0.68 -1.1 758,861 - Psest_0693 0.68 -1.9 758,861 - Psest_0693 0.68 -1.4 758,986 + Psest_0693 0.74 -0.4 758,987 - Psest_0693 0.74 +0.2 758,987 - Psest_0693 0.74 -0.9 759,077 + Psest_0693 0.78 -0.9 759,077 + Psest_0693 0.78 -0.4 759,077 + Psest_0693 0.78 -0.2 759,077 + Psest_0693 0.78 -0.0 759,078 - Psest_0693 0.78 -0.2 759,078 - Psest_0693 0.78 -0.6 759,078 - Psest_0693 0.78 -0.8 759,078 - Psest_0693 0.78 -1.0 759,078 - Psest_0693 0.78 -0.5 759,078 - Psest_0693 0.78 -1.0 759,078 - Psest_0693 0.78 -1.0 759,078 - Psest_0693 0.78 -0.6 759,078 - Psest_0693 0.78 -0.2 759,078 - Psest_0693 0.78 -0.0 759,078 - Psest_0693 0.78 -0.4 759,329 + Psest_0693 0.90 +0.6 759,329 + Psest_0693 0.90 -1.2 759,329 + Psest_0693 0.90 -1.3 759,329 + Psest_0693 0.90 -1.5 759,329 + Psest_0693 0.90 -2.1 759,329 + Psest_0693 0.90 -1.2 759,329 + Psest_0693 0.90 -0.6 759,330 - Psest_0693 0.90 -1.0 759,330 - Psest_0693 0.90 -2.2 759,330 - Psest_0693 0.90 -1.3 759,330 - Psest_0693 0.90 -1.4 759,330 - Psest_0693 0.90 -1.7 759,330 - Psest_0693 0.90 -1.6 759,330 - Psest_0693 0.90 -1.0 759,330 - Psest_0693 0.90 -2.1 759,330 - Psest_0693 0.90 -0.6 759,330 - Psest_0693 0.90 -1.3 759,330 - Psest_0693 0.90 -0.6 759,487 + -1.4 759,487 + -0.7 759,488 - -0.6 759,549 + -1.4 759,549 + -0.6 759,549 + +0.3 759,550 - +0.8 759,556 + -3.3 759,556 + -0.2 759,615 + +1.6 759,615 + -0.7 759,615 + -0.4 759,615 + +0.8 760,729 + Psest_0696 0.32 +0.4 760,729 + Psest_0696 0.32 +1.3 760,729 + Psest_0696 0.32 +1.0 760,730 - Psest_0696 0.32 -0.2 760,755 + Psest_0696 0.35 -1.2 760,755 + Psest_0696 0.35 -0.6 760,755 + Psest_0696 0.35 +0.5 760,755 + Psest_0696 0.35 +0.3 760,755 + Psest_0696 0.35 -0.3 760,755 + Psest_0696 0.35 -0.2 760,755 + Psest_0696 0.35 +0.7 760,755 + Psest_0696 0.35 -0.2 760,755 + Psest_0696 0.35 +0.9 760,755 + Psest_0696 0.35 +0.9 760,756 - Psest_0696 0.35 -0.4 760,986 + Psest_0696 0.60 -0.7 760,987 - Psest_0696 0.61 -1.0 761,131 + Psest_0696 0.77 -0.2
Or see this region's nucleotide sequence