Experiment: D-Maltose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_0673 and Psest_0674 are separated by 107 nucleotides Psest_0674 and Psest_0675 are separated by 1 nucleotides Psest_0675 and Psest_0676 are separated by 100 nucleotides
Psest_0673: Psest_0673 - UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase, at 734,849 to 736,198
_0673
Psest_0674: Psest_0674 - polyprenyl P-hydroxybenzoate and phenylacrylic acid decarboxylases, at 736,306 to 736,935
_0674
Psest_0675: Psest_0675 - Predicted periplasmic lipoprotein, at 736,937 to 737,227
_0675
Psest_0676: Psest_0676 - ATP-dependent metalloprotease FtsH, at 737,328 to 739,175
_0676
Position (kb) 736
737 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 735.332 kb on + strand, within Psest_0673 at 735.827 kb on + strand, within Psest_0673 at 735.828 kb on - strand, within Psest_0673 at 735.828 kb on - strand, within Psest_0673 at 735.828 kb on - strand, within Psest_0673 at 735.828 kb on - strand, within Psest_0673 at 735.828 kb on - strand, within Psest_0673 at 735.898 kb on + strand, within Psest_0673 at 735.898 kb on + strand, within Psest_0673 at 736.067 kb on - strand at 736.236 kb on + strand at 736.236 kb on + strand at 736.236 kb on + strand at 736.256 kb on + strand at 736.917 kb on + strand at 737.039 kb on + strand, within Psest_0675 at 737.039 kb on + strand, within Psest_0675 at 737.039 kb on + strand, within Psest_0675 at 737.039 kb on + strand, within Psest_0675 at 737.040 kb on - strand, within Psest_0675 at 737.040 kb on - strand, within Psest_0675 at 737.121 kb on - strand, within Psest_0675 at 737.121 kb on - strand, within Psest_0675 at 737.225 kb on + strand at 737.226 kb on - strand at 737.226 kb on - strand at 737.226 kb on - strand at 737.226 kb on - strand at 737.276 kb on + strand at 737.276 kb on + strand at 737.358 kb on + strand at 737.398 kb on - strand at 737.398 kb on - strand at 737.398 kb on - strand at 737.437 kb on - strand at 737.437 kb on - strand at 737.502 kb on - strand at 737.502 kb on - strand at 737.502 kb on - strand at 737.503 kb on + strand at 737.503 kb on + strand at 737.503 kb on + strand at 737.503 kb on + strand at 737.503 kb on + strand at 737.503 kb on + strand at 737.503 kb on + strand at 737.503 kb on + strand at 737.503 kb on + strand at 737.503 kb on + strand at 737.504 kb on - strand at 737.504 kb on - strand at 737.504 kb on - strand at 737.607 kb on + strand, within Psest_0676 at 737.766 kb on + strand, within Psest_0676 at 737.872 kb on - strand, within Psest_0676 at 737.872 kb on - strand, within Psest_0676
Per-strain Table
Position Strand Gene LocusTag Fraction D-Maltose (C) remove 735,332 + Psest_0673 0.36 -2.9 735,827 + Psest_0673 0.72 -2.3 735,828 - Psest_0673 0.73 -2.3 735,828 - Psest_0673 0.73 +0.6 735,828 - Psest_0673 0.73 -1.4 735,828 - Psest_0673 0.73 -3.0 735,828 - Psest_0673 0.73 -0.5 735,898 + Psest_0673 0.78 -1.0 735,898 + Psest_0673 0.78 -0.2 736,067 - -0.2 736,236 + +2.1 736,236 + -0.0 736,236 + +0.0 736,256 + -0.4 736,917 + -0.2 737,039 + Psest_0675 0.35 -1.2 737,039 + Psest_0675 0.35 -0.0 737,039 + Psest_0675 0.35 -0.2 737,039 + Psest_0675 0.35 +0.2 737,040 - Psest_0675 0.35 -0.8 737,040 - Psest_0675 0.35 +0.5 737,121 - Psest_0675 0.63 -0.1 737,121 - Psest_0675 0.63 +0.4 737,225 + +1.0 737,226 - -0.6 737,226 - +0.1 737,226 - -0.3 737,226 - +0.6 737,276 + +0.8 737,276 + -0.4 737,358 + +0.6 737,398 - -0.2 737,398 - +0.1 737,398 - -1.8 737,437 - +1.8 737,437 - -0.2 737,502 - +0.1 737,502 - +1.5 737,502 - -0.2 737,503 + +0.1 737,503 + -0.6 737,503 + +0.0 737,503 + -0.6 737,503 + -0.3 737,503 + +0.2 737,503 + -0.2 737,503 + -0.2 737,503 + -0.3 737,503 + -0.1 737,504 - +0.9 737,504 - -1.0 737,504 - +0.6 737,607 + Psest_0676 0.15 -1.7 737,766 + Psest_0676 0.24 -1.9 737,872 - Psest_0676 0.29 +0.1 737,872 - Psest_0676 0.29 -0.3
Or see this region's nucleotide sequence