Experiment: D-Maltose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_0523 and Psest_0524 are separated by 37 nucleotides Psest_0524 and Psest_0525 are separated by 43 nucleotides Psest_0525 and Psest_0526 are separated by 263 nucleotides Psest_0526 and Psest_0527 are separated by 66 nucleotides
Psest_0523: Psest_0523 - DNA polymerase III, delta subunit, at 575,228 to 576,256
_0523
Psest_0524: Psest_0524 - Rare lipoprotein B, at 576,294 to 576,899
_0524
Psest_0525: Psest_0525 - leucyl-tRNA synthetase, eubacterial and mitochondrial family, at 576,943 to 579,549
_0525
Psest_0526: Psest_0526 - hypothetical protein, at 579,813 to 580,262
_0526
Psest_0527: Psest_0527 - Uncharacterized conserved protein, at 580,329 to 581,102
_0527
Position (kb) 576
577
578
579
580 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1 at 576.295 kb on + strand at 579.681 kb on - strand at 579.681 kb on - strand at 579.681 kb on - strand at 579.681 kb on - strand at 579.681 kb on - strand at 579.681 kb on - strand at 579.681 kb on - strand at 579.681 kb on - strand at 579.681 kb on - strand at 579.681 kb on - strand at 579.681 kb on - strand at 579.681 kb on - strand at 579.772 kb on + strand at 579.773 kb on - strand at 579.773 kb on - strand at 579.849 kb on + strand at 579.849 kb on + strand at 579.849 kb on + strand at 579.849 kb on + strand at 579.978 kb on + strand, within Psest_0526 at 579.979 kb on - strand, within Psest_0526 at 580.244 kb on + strand at 580.244 kb on + strand at 580.245 kb on - strand at 580.245 kb on - strand at 580.245 kb on - strand at 580.341 kb on + strand at 580.342 kb on - strand at 580.492 kb on + strand, within Psest_0527 at 580.493 kb on - strand, within Psest_0527 at 580.493 kb on - strand, within Psest_0527 at 580.493 kb on - strand, within Psest_0527
Per-strain Table
Position Strand Gene LocusTag Fraction D-Maltose (C) remove 576,295 + -0.8 579,681 - -3.9 579,681 - -1.6 579,681 - -2.8 579,681 - -1.3 579,681 - -1.0 579,681 - +0.3 579,681 - +0.8 579,681 - -2.1 579,681 - -1.3 579,681 - -1.7 579,681 - -0.3 579,681 - -1.1 579,772 + +1.1 579,773 - +0.4 579,773 - -1.6 579,849 + -0.4 579,849 + -1.0 579,849 + +0.1 579,849 + -0.4 579,978 + Psest_0526 0.37 -0.1 579,979 - Psest_0526 0.37 -0.1 580,244 + -0.1 580,244 + -1.0 580,245 - -3.6 580,245 - -0.5 580,245 - -1.3 580,341 + -0.5 580,342 - -2.3 580,492 + Psest_0527 0.21 +0.1 580,493 - Psest_0527 0.21 +0.2 580,493 - Psest_0527 0.21 -0.1 580,493 - Psest_0527 0.21 +1.4
Or see this region's nucleotide sequence