Experiment: D-Maltose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_0516 and Psest_0517 are separated by 66 nucleotides Psest_0517 and Psest_0518 overlap by 1 nucleotides Psest_0518 and Psest_0519 overlap by 8 nucleotides
Psest_0516: Psest_0516 - D-alanyl-D-alanine carboxypeptidase, at 569,850 to 571,007
_0516
Psest_0517: Psest_0517 - Uncharacterized conserved protein, at 571,074 to 571,355
_0517
Psest_0518: Psest_0518 - lipoate-protein ligase B, at 571,355 to 572,011
_0518
Psest_0519: Psest_0519 - lipoate synthase, at 572,004 to 572,981
_0519
Position (kb) 571
572 Strain fitness (log2 ratio) -2
-1
0
1
2 at 570.152 kb on + strand, within Psest_0516 at 570.153 kb on - strand, within Psest_0516 at 570.153 kb on - strand, within Psest_0516 at 570.284 kb on + strand, within Psest_0516 at 570.284 kb on + strand, within Psest_0516 at 570.284 kb on + strand, within Psest_0516 at 570.285 kb on - strand, within Psest_0516 at 570.285 kb on - strand, within Psest_0516 at 570.285 kb on - strand, within Psest_0516 at 570.285 kb on - strand, within Psest_0516 at 570.408 kb on + strand, within Psest_0516 at 570.408 kb on + strand, within Psest_0516 at 570.408 kb on + strand, within Psest_0516 at 570.408 kb on + strand, within Psest_0516 at 570.408 kb on + strand, within Psest_0516 at 570.408 kb on + strand, within Psest_0516 at 570.408 kb on + strand, within Psest_0516 at 570.408 kb on + strand, within Psest_0516 at 570.408 kb on + strand, within Psest_0516 at 570.408 kb on + strand, within Psest_0516 at 570.408 kb on + strand, within Psest_0516 at 570.409 kb on - strand, within Psest_0516 at 570.409 kb on - strand, within Psest_0516 at 570.409 kb on - strand, within Psest_0516 at 570.409 kb on - strand, within Psest_0516 at 570.435 kb on + strand, within Psest_0516 at 570.435 kb on + strand, within Psest_0516 at 570.436 kb on - strand, within Psest_0516 at 570.436 kb on - strand, within Psest_0516 at 570.436 kb on - strand, within Psest_0516 at 570.436 kb on - strand, within Psest_0516 at 570.436 kb on - strand, within Psest_0516 at 570.436 kb on - strand, within Psest_0516 at 570.436 kb on - strand, within Psest_0516 at 570.436 kb on - strand, within Psest_0516 at 570.436 kb on - strand, within Psest_0516 at 570.436 kb on - strand, within Psest_0516 at 570.436 kb on - strand, within Psest_0516 at 570.436 kb on - strand, within Psest_0516 at 570.436 kb on - strand, within Psest_0516 at 570.436 kb on - strand, within Psest_0516 at 570.436 kb on - strand, within Psest_0516 at 570.657 kb on + strand, within Psest_0516 at 570.658 kb on - strand, within Psest_0516 at 570.690 kb on + strand, within Psest_0516 at 570.691 kb on - strand, within Psest_0516 at 570.702 kb on - strand, within Psest_0516 at 570.971 kb on + strand at 570.990 kb on + strand at 572.003 kb on + strand at 572.003 kb on + strand at 572.003 kb on + strand at 572.003 kb on + strand at 572.003 kb on + strand at 572.003 kb on + strand at 572.003 kb on + strand at 572.003 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction D-Maltose (C) remove 570,152 + Psest_0516 0.26 +0.7 570,153 - Psest_0516 0.26 +0.4 570,153 - Psest_0516 0.26 +0.4 570,284 + Psest_0516 0.37 -1.3 570,284 + Psest_0516 0.37 +0.9 570,284 + Psest_0516 0.37 +0.1 570,285 - Psest_0516 0.38 -2.4 570,285 - Psest_0516 0.38 +1.0 570,285 - Psest_0516 0.38 -0.1 570,285 - Psest_0516 0.38 +0.6 570,408 + Psest_0516 0.48 +0.9 570,408 + Psest_0516 0.48 +0.6 570,408 + Psest_0516 0.48 -0.3 570,408 + Psest_0516 0.48 -1.1 570,408 + Psest_0516 0.48 -0.3 570,408 + Psest_0516 0.48 +0.5 570,408 + Psest_0516 0.48 +0.5 570,408 + Psest_0516 0.48 +0.7 570,408 + Psest_0516 0.48 +0.1 570,408 + Psest_0516 0.48 +0.2 570,408 + Psest_0516 0.48 +1.2 570,409 - Psest_0516 0.48 +0.5 570,409 - Psest_0516 0.48 -0.3 570,409 - Psest_0516 0.48 +1.1 570,409 - Psest_0516 0.48 +1.0 570,435 + Psest_0516 0.51 +0.7 570,435 + Psest_0516 0.51 +0.2 570,436 - Psest_0516 0.51 -0.3 570,436 - Psest_0516 0.51 +0.9 570,436 - Psest_0516 0.51 -0.4 570,436 - Psest_0516 0.51 +0.0 570,436 - Psest_0516 0.51 -0.3 570,436 - Psest_0516 0.51 +0.1 570,436 - Psest_0516 0.51 +0.2 570,436 - Psest_0516 0.51 +0.2 570,436 - Psest_0516 0.51 -1.3 570,436 - Psest_0516 0.51 -1.2 570,436 - Psest_0516 0.51 -0.4 570,436 - Psest_0516 0.51 -0.7 570,436 - Psest_0516 0.51 +0.7 570,436 - Psest_0516 0.51 -1.6 570,436 - Psest_0516 0.51 -0.3 570,657 + Psest_0516 0.70 +1.4 570,658 - Psest_0516 0.70 -0.7 570,690 + Psest_0516 0.73 -0.8 570,691 - Psest_0516 0.73 -1.2 570,702 - Psest_0516 0.74 +0.2 570,971 + +1.8 570,990 + -1.4 572,003 + -0.3 572,003 + +0.2 572,003 + +1.1 572,003 + +0.4 572,003 + -0.2 572,003 + -0.2 572,003 + +0.1 572,003 + -0.7
Or see this region's nucleotide sequence