Experiment: D-Maltose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_0484 and Psest_0485 overlap by 4 nucleotides Psest_0485 and Psest_0486 overlap by 4 nucleotides Psest_0486 and Psest_0487 are separated by 183 nucleotides Psest_0487 and Psest_0488 are separated by 104 nucleotides
Psest_0484: Psest_0484 - hypothetical protein, at 534,478 to 535,461
_0484
Psest_0485: Psest_0485 - clan AA aspartic protease, TIGR02281 family, at 535,458 to 535,985
_0485
Psest_0486: Psest_0486 - DNA topoisomerase IV, A subunit, proteobacterial, at 535,982 to 538,234
_0486
Psest_0487: Psest_0487 - Uncharacterized protein conserved in bacteria, at 538,418 to 539,125
_0487
Psest_0488: Psest_0488 - Uncharacterized membrane protein affecting hemolysin expression, at 539,230 to 540,762
_0488
Position (kb) 535
536
537
538
539 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 535.094 kb on + strand, within Psest_0484 at 535.095 kb on - strand, within Psest_0484 at 535.315 kb on + strand, within Psest_0484 at 535.371 kb on + strand at 535.371 kb on + strand at 535.371 kb on + strand at 535.371 kb on + strand at 535.371 kb on + strand at 535.612 kb on + strand, within Psest_0485 at 535.618 kb on + strand, within Psest_0485 at 535.618 kb on + strand, within Psest_0485 at 535.619 kb on - strand, within Psest_0485 at 535.619 kb on - strand, within Psest_0485 at 535.619 kb on - strand, within Psest_0485 at 535.619 kb on - strand, within Psest_0485 at 535.664 kb on + strand, within Psest_0485 at 535.665 kb on - strand, within Psest_0485 at 538.408 kb on + strand at 538.408 kb on + strand at 538.408 kb on + strand at 538.409 kb on - strand at 538.505 kb on + strand, within Psest_0487 at 538.506 kb on - strand, within Psest_0487 at 538.522 kb on + strand, within Psest_0487 at 538.589 kb on + strand, within Psest_0487 at 538.589 kb on + strand, within Psest_0487 at 538.589 kb on + strand, within Psest_0487 at 538.589 kb on + strand, within Psest_0487 at 538.589 kb on + strand, within Psest_0487 at 538.932 kb on + strand, within Psest_0487 at 538.933 kb on - strand, within Psest_0487 at 538.933 kb on - strand, within Psest_0487 at 538.933 kb on - strand, within Psest_0487 at 538.948 kb on - strand, within Psest_0487
Per-strain Table
Position Strand Gene LocusTag Fraction D-Maltose (C) remove 535,094 + Psest_0484 0.63 -0.5 535,095 - Psest_0484 0.63 -0.7 535,315 + Psest_0484 0.85 +0.4 535,371 + +0.5 535,371 + +1.1 535,371 + +1.5 535,371 + +1.0 535,371 + +0.4 535,612 + Psest_0485 0.29 +0.3 535,618 + Psest_0485 0.30 +0.1 535,618 + Psest_0485 0.30 -0.5 535,619 - Psest_0485 0.30 -1.8 535,619 - Psest_0485 0.30 -0.4 535,619 - Psest_0485 0.30 +1.1 535,619 - Psest_0485 0.30 -3.5 535,664 + Psest_0485 0.39 -0.2 535,665 - Psest_0485 0.39 +0.1 538,408 + +0.2 538,408 + -0.9 538,408 + -1.0 538,409 - -0.2 538,505 + Psest_0487 0.12 +0.4 538,506 - Psest_0487 0.12 -1.1 538,522 + Psest_0487 0.15 -1.1 538,589 + Psest_0487 0.24 +0.2 538,589 + Psest_0487 0.24 +0.5 538,589 + Psest_0487 0.24 -0.6 538,589 + Psest_0487 0.24 -1.2 538,589 + Psest_0487 0.24 +0.2 538,932 + Psest_0487 0.73 +0.2 538,933 - Psest_0487 0.73 +0.3 538,933 - Psest_0487 0.73 +1.7 538,933 - Psest_0487 0.73 +1.7 538,948 - Psest_0487 0.75 +0.6
Or see this region's nucleotide sequence