Experiment: D-Maltose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_0447 and Psest_0448 are separated by 24 nucleotides Psest_0448 and Psest_0449 are separated by 265 nucleotides
Psest_0447: Psest_0447 - pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase, long form, at 488,237 to 490,240
_0447
Psest_0448: Psest_0448 - pyruvate dehydrogenase E1 component, homodimeric type, at 490,265 to 492,910
_0448
Psest_0449: Psest_0449 - Glutamine synthetase adenylyltransferase, at 493,176 to 496,121
_0449
Position (kb) 490
491
492
493 Strain fitness (log2 ratio) -2
-1
0
1 at 490.244 kb on - strand at 490.244 kb on - strand at 492.984 kb on - strand at 493.123 kb on - strand at 493.162 kb on + strand at 493.626 kb on + strand, within Psest_0449 at 493.626 kb on + strand, within Psest_0449 at 493.627 kb on - strand, within Psest_0449 at 493.638 kb on + strand, within Psest_0449 at 493.638 kb on + strand, within Psest_0449 at 493.638 kb on + strand, within Psest_0449 at 493.639 kb on - strand, within Psest_0449 at 493.639 kb on - strand, within Psest_0449 at 493.639 kb on - strand, within Psest_0449 at 493.639 kb on - strand, within Psest_0449 at 493.639 kb on - strand, within Psest_0449 at 493.639 kb on - strand, within Psest_0449 at 493.667 kb on - strand, within Psest_0449 at 493.742 kb on + strand, within Psest_0449 at 493.743 kb on - strand, within Psest_0449
Per-strain Table
Position Strand Gene LocusTag Fraction D-Maltose (C) remove 490,244 - -0.7 490,244 - +0.1 492,984 - -0.0 493,123 - +1.1 493,162 + -0.7 493,626 + Psest_0449 0.15 +0.0 493,626 + Psest_0449 0.15 +0.4 493,627 - Psest_0449 0.15 +1.5 493,638 + Psest_0449 0.16 +1.0 493,638 + Psest_0449 0.16 -0.6 493,638 + Psest_0449 0.16 +0.6 493,639 - Psest_0449 0.16 -1.9 493,639 - Psest_0449 0.16 +0.7 493,639 - Psest_0449 0.16 -0.1 493,639 - Psest_0449 0.16 +0.6 493,639 - Psest_0449 0.16 -0.2 493,639 - Psest_0449 0.16 +1.0 493,667 - Psest_0449 0.17 -0.4 493,742 + Psest_0449 0.19 +0.4 493,743 - Psest_0449 0.19 +0.3
Or see this region's nucleotide sequence