Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_4355

Experiment: D-Maltose (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntPsest_4354 and Psest_4355 are separated by 30 nucleotidesPsest_4355 and Psest_4356 are separated by 50 nucleotides Psest_4354: Psest_4354 - ATP synthase, F1 beta subunit, at 4,554,091 to 4,555,467 _4354 Psest_4355: Psest_4355 - ATP synthase, F1 gamma subunit, at 4,555,498 to 4,556,364 _4355 Psest_4356: Psest_4356 - proton translocating ATP synthase, F1 alpha subunit, at 4,556,415 to 4,557,959 _4356 Position (kb) 4555 4556 4557Strain fitness (log2 ratio) -1 0 1at 4555.485 kb on - strandat 4555.485 kb on - strandat 4555.500 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction D-Maltose (C)
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4,555,485 - -1.4
4,555,485 - -0.5
4,555,500 - -0.4

Or see this region's nucleotide sequence