Experiment: D-Maltose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_4209 and Psest_4210 are separated by 114 nucleotides Psest_4210 and Psest_4211 are separated by 108 nucleotides Psest_4211 and Psest_4212 are separated by 43 nucleotides Psest_4212 and Psest_4213 overlap by 4 nucleotides
Psest_4209: Psest_4209 - Uncharacterized conserved small protein, at 4,387,178 to 4,387,378
_4209
Psest_4210: Psest_4210 - conserverd hypothetical protein, at 4,387,493 to 4,387,810
_4210
Psest_4211: Psest_4211 - conserverd hypothetical protein, at 4,387,919 to 4,388,215
_4211
Psest_4212: Psest_4212 - conserverd hypothetical protein, at 4,388,259 to 4,388,579
_4212
Psest_4213: Psest_4213 - hypothetical protein, at 4,388,576 to 4,390,531
_4213
Position (kb) 4388
4389 Strain fitness (log2 ratio) -2
-1
0
1 at 4387.271 kb on + strand, within Psest_4209 at 4387.271 kb on + strand, within Psest_4209 at 4387.272 kb on - strand, within Psest_4209 at 4387.391 kb on + strand at 4387.414 kb on + strand at 4387.460 kb on + strand at 4387.461 kb on - strand at 4387.461 kb on - strand at 4387.467 kb on + strand at 4387.467 kb on + strand at 4387.479 kb on - strand at 4387.603 kb on + strand, within Psest_4210 at 4387.973 kb on + strand, within Psest_4211 at 4388.015 kb on + strand, within Psest_4211 at 4388.015 kb on + strand, within Psest_4211 at 4388.015 kb on + strand, within Psest_4211 at 4388.016 kb on - strand, within Psest_4211 at 4388.016 kb on - strand, within Psest_4211 at 4388.016 kb on - strand, within Psest_4211 at 4388.016 kb on - strand, within Psest_4211 at 4388.016 kb on - strand, within Psest_4211 at 4388.214 kb on - strand at 4388.270 kb on - strand at 4388.270 kb on - strand at 4388.270 kb on - strand at 4388.270 kb on - strand at 4388.270 kb on - strand at 4388.270 kb on - strand at 4388.804 kb on + strand, within Psest_4213 at 4388.805 kb on - strand, within Psest_4213 at 4389.194 kb on + strand, within Psest_4213 at 4389.239 kb on + strand, within Psest_4213 at 4389.240 kb on - strand, within Psest_4213 at 4389.260 kb on + strand, within Psest_4213 at 4389.260 kb on + strand, within Psest_4213 at 4389.261 kb on - strand, within Psest_4213 at 4389.261 kb on - strand, within Psest_4213 at 4389.290 kb on + strand, within Psest_4213 at 4389.348 kb on - strand, within Psest_4213 at 4389.349 kb on + strand, within Psest_4213 at 4389.349 kb on + strand, within Psest_4213 at 4389.349 kb on + strand, within Psest_4213 at 4389.349 kb on + strand, within Psest_4213 at 4389.349 kb on + strand, within Psest_4213 at 4389.349 kb on + strand, within Psest_4213 at 4389.349 kb on + strand, within Psest_4213 at 4389.349 kb on + strand, within Psest_4213 at 4389.349 kb on + strand, within Psest_4213 at 4389.349 kb on + strand, within Psest_4213 at 4389.349 kb on + strand, within Psest_4213 at 4389.350 kb on - strand, within Psest_4213 at 4389.350 kb on - strand, within Psest_4213 at 4389.350 kb on - strand, within Psest_4213 at 4389.417 kb on - strand, within Psest_4213 at 4389.429 kb on - strand at 4389.483 kb on + strand, within Psest_4213 at 4389.483 kb on + strand, within Psest_4213 at 4389.484 kb on - strand, within Psest_4213 at 4389.484 kb on - strand, within Psest_4213 at 4389.484 kb on - strand, within Psest_4213
Per-strain Table
Position Strand Gene LocusTag Fraction D-Maltose (C) remove 4,387,271 + Psest_4209 0.46 -0.9 4,387,271 + Psest_4209 0.46 -0.6 4,387,272 - Psest_4209 0.47 -1.6 4,387,391 + +1.3 4,387,414 + -0.1 4,387,460 + -0.9 4,387,461 - +1.3 4,387,461 - -0.0 4,387,467 + -1.2 4,387,467 + -1.6 4,387,479 - +0.3 4,387,603 + Psest_4210 0.35 -0.3 4,387,973 + Psest_4211 0.18 -1.0 4,388,015 + Psest_4211 0.32 -0.2 4,388,015 + Psest_4211 0.32 +0.3 4,388,015 + Psest_4211 0.32 -0.0 4,388,016 - Psest_4211 0.33 -0.5 4,388,016 - Psest_4211 0.33 -1.3 4,388,016 - Psest_4211 0.33 +0.2 4,388,016 - Psest_4211 0.33 +1.4 4,388,016 - Psest_4211 0.33 -0.1 4,388,214 - -0.8 4,388,270 - +1.2 4,388,270 - -0.4 4,388,270 - +0.4 4,388,270 - +0.4 4,388,270 - -0.5 4,388,270 - +0.8 4,388,804 + Psest_4213 0.12 +0.2 4,388,805 - Psest_4213 0.12 +0.6 4,389,194 + Psest_4213 0.32 -2.3 4,389,239 + Psest_4213 0.34 -0.9 4,389,240 - Psest_4213 0.34 -2.3 4,389,260 + Psest_4213 0.35 +1.4 4,389,260 + Psest_4213 0.35 -0.7 4,389,261 - Psest_4213 0.35 -2.3 4,389,261 - Psest_4213 0.35 -0.6 4,389,290 + Psest_4213 0.37 +0.4 4,389,348 - Psest_4213 0.39 -1.2 4,389,349 + Psest_4213 0.40 -0.7 4,389,349 + Psest_4213 0.40 +0.7 4,389,349 + Psest_4213 0.40 -0.3 4,389,349 + Psest_4213 0.40 +0.7 4,389,349 + Psest_4213 0.40 +0.6 4,389,349 + Psest_4213 0.40 -1.0 4,389,349 + Psest_4213 0.40 -0.1 4,389,349 + Psest_4213 0.40 +0.5 4,389,349 + Psest_4213 0.40 +0.3 4,389,349 + Psest_4213 0.40 -0.0 4,389,349 + Psest_4213 0.40 -2.3 4,389,350 - Psest_4213 0.40 +0.6 4,389,350 - Psest_4213 0.40 -0.3 4,389,350 - Psest_4213 0.40 +0.4 4,389,417 - Psest_4213 0.43 +0.1 4,389,429 - +1.3 4,389,483 + Psest_4213 0.46 -1.5 4,389,483 + Psest_4213 0.46 -0.5 4,389,484 - Psest_4213 0.46 +0.5 4,389,484 - Psest_4213 0.46 +0.7 4,389,484 - Psest_4213 0.46 -0.1
Or see this region's nucleotide sequence