Experiment: D-Maltose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_4172 and Psest_4173 are separated by 20 nucleotides Psest_4173 and Psest_4174 are separated by 20 nucleotides
Psest_4172: Psest_4172 - flagellar basal-body M-ring protein/flagellar hook-basal body protein (fliF), at 4,350,463 to 4,352,139
_4172
Psest_4173: Psest_4173 - flagellar hook-basal body complex protein FliE, at 4,352,160 to 4,352,480
_4173
Psest_4174: Psest_4174 - Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains, at 4,352,501 to 4,353,913
_4174
Position (kb)
4352
4353 Strain fitness (log2 ratio)
-2
-1
0
1 at 4351.428 kb on - strand, within Psest_4172 at 4351.473 kb on + strand, within Psest_4172 at 4351.474 kb on - strand, within Psest_4172 at 4351.699 kb on + strand, within Psest_4172 at 4351.699 kb on + strand, within Psest_4172 at 4351.700 kb on - strand, within Psest_4172 at 4351.700 kb on - strand, within Psest_4172 at 4351.945 kb on + strand, within Psest_4172 at 4351.946 kb on - strand, within Psest_4172 at 4351.946 kb on - strand, within Psest_4172 at 4352.024 kb on + strand at 4352.024 kb on + strand at 4352.024 kb on + strand at 4352.024 kb on + strand at 4352.144 kb on + strand at 4352.144 kb on + strand at 4352.144 kb on + strand at 4352.144 kb on + strand at 4352.145 kb on - strand at 4352.145 kb on - strand at 4352.145 kb on - strand at 4352.898 kb on + strand, within Psest_4174 at 4352.898 kb on + strand, within Psest_4174 at 4352.899 kb on - strand, within Psest_4174 at 4352.899 kb on - strand, within Psest_4174 at 4353.346 kb on - strand, within Psest_4174
Per-strain Table
Position Strand Gene LocusTag Fraction D-Maltose (C) remove 4,351,428 - Psest_4172 0.58 -0.5 4,351,473 + Psest_4172 0.60 +0.1 4,351,474 - Psest_4172 0.60 -0.6 4,351,699 + Psest_4172 0.74 +0.4 4,351,699 + Psest_4172 0.74 +0.7 4,351,700 - Psest_4172 0.74 -0.1 4,351,700 - Psest_4172 0.74 -0.1 4,351,945 + Psest_4172 0.88 +1.1 4,351,946 - Psest_4172 0.88 -0.3 4,351,946 - Psest_4172 0.88 -1.0 4,352,024 + -0.3 4,352,024 + -2.4 4,352,024 + +1.2 4,352,024 + -0.8 4,352,144 + +0.7 4,352,144 + +1.4 4,352,144 + +1.1 4,352,144 + -0.6 4,352,145 - +0.7 4,352,145 - +0.7 4,352,145 - +0.1 4,352,898 + Psest_4174 0.28 +0.4 4,352,898 + Psest_4174 0.28 -0.4 4,352,899 - Psest_4174 0.28 -1.4 4,352,899 - Psest_4174 0.28 +0.2 4,353,346 - Psest_4174 0.60 +0.8
Or see this region's nucleotide sequence