Experiment: D-Maltose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_3637 and Psest_3638 are separated by 46 nucleotides Psest_3638 and Psest_3639 are separated by 103 nucleotides Psest_3639 and Psest_3640 are separated by 128 nucleotides Psest_3640 and Psest_3641 are separated by 131 nucleotides
Psest_3637: Psest_3637 - Predicted molecular chaperone distantly related to HSP70-fold metalloproteases, at 3,799,177 to 3,800,268
_3637
Psest_3638: Psest_3638 - Iron-sulfur cluster assembly accessory protein, at 3,800,315 to 3,800,665
_3638
Psest_3639: Psest_3639 - N-acetyl-gamma-glutamyl-phosphate reductase, common form, at 3,800,769 to 3,801,803
_3639
Psest_3640: Psest_3640 - TIGR00701 family protein, at 3,801,932 to 3,802,360
_3640
Psest_3641: Psest_3641 - Predicted membrane protein, at 3,802,492 to 3,803,448
_3641
Position (kb)
3800
3801
3802 Strain fitness (log2 ratio)
-1
0
1
2
3 at 3799.833 kb on - strand, within Psest_3637 at 3799.943 kb on + strand, within Psest_3637 at 3799.943 kb on + strand, within Psest_3637 at 3799.944 kb on - strand, within Psest_3637 at 3799.944 kb on - strand, within Psest_3637 at 3799.944 kb on - strand, within Psest_3637 at 3799.944 kb on - strand, within Psest_3637 at 3799.944 kb on - strand, within Psest_3637 at 3800.042 kb on + strand, within Psest_3637 at 3800.043 kb on - strand, within Psest_3637 at 3800.043 kb on - strand, within Psest_3637 at 3800.062 kb on - strand, within Psest_3637 at 3800.112 kb on - strand, within Psest_3637 at 3800.151 kb on - strand, within Psest_3637 at 3800.257 kb on + strand at 3800.266 kb on + strand at 3800.739 kb on + strand at 3800.750 kb on + strand at 3800.757 kb on + strand at 3800.757 kb on + strand at 3800.758 kb on - strand at 3800.758 kb on - strand at 3800.758 kb on - strand at 3800.758 kb on - strand at 3800.758 kb on - strand at 3800.758 kb on - strand at 3800.758 kb on - strand at 3800.758 kb on - strand at 3801.827 kb on - strand at 3801.827 kb on - strand at 3801.896 kb on + strand at 3801.897 kb on - strand at 3801.897 kb on - strand at 3802.454 kb on + strand at 3802.454 kb on + strand at 3802.454 kb on + strand at 3802.455 kb on - strand at 3802.455 kb on - strand at 3802.455 kb on - strand at 3802.455 kb on - strand at 3802.471 kb on + strand at 3802.471 kb on + strand at 3802.472 kb on - strand at 3802.472 kb on - strand at 3802.634 kb on + strand, within Psest_3641 at 3802.669 kb on - strand, within Psest_3641 at 3802.672 kb on + strand, within Psest_3641 at 3802.672 kb on + strand, within Psest_3641 at 3802.673 kb on - strand, within Psest_3641 at 3802.673 kb on - strand, within Psest_3641 at 3802.673 kb on - strand, within Psest_3641 at 3802.673 kb on - strand, within Psest_3641 at 3802.673 kb on - strand, within Psest_3641 at 3802.673 kb on - strand, within Psest_3641 at 3802.673 kb on - strand, within Psest_3641
Per-strain Table
Position Strand Gene LocusTag Fraction D-Maltose (C) remove 3,799,833 - Psest_3637 0.60 +1.7 3,799,943 + Psest_3637 0.70 +1.7 3,799,943 + Psest_3637 0.70 +0.7 3,799,944 - Psest_3637 0.70 +1.7 3,799,944 - Psest_3637 0.70 +1.9 3,799,944 - Psest_3637 0.70 +0.7 3,799,944 - Psest_3637 0.70 +3.7 3,799,944 - Psest_3637 0.70 +1.7 3,800,042 + Psest_3637 0.79 +3.3 3,800,043 - Psest_3637 0.79 +0.7 3,800,043 - Psest_3637 0.79 +1.7 3,800,062 - Psest_3637 0.81 +0.7 3,800,112 - Psest_3637 0.86 +2.7 3,800,151 - Psest_3637 0.89 +1.7 3,800,257 + +1.7 3,800,266 + -0.2 3,800,739 + +0.0 3,800,750 + +0.5 3,800,757 + -0.3 3,800,757 + +1.0 3,800,758 - +1.5 3,800,758 - -1.6 3,800,758 - -0.1 3,800,758 - -0.2 3,800,758 - -1.4 3,800,758 - +0.3 3,800,758 - -0.0 3,800,758 - +0.3 3,801,827 - -1.5 3,801,827 - +0.2 3,801,896 + -0.5 3,801,897 - +0.1 3,801,897 - +0.5 3,802,454 + +0.3 3,802,454 + +0.4 3,802,454 + -0.0 3,802,455 - +0.5 3,802,455 - -0.7 3,802,455 - -1.0 3,802,455 - +0.6 3,802,471 + -1.4 3,802,471 + +0.4 3,802,472 - +0.3 3,802,472 - -0.5 3,802,634 + Psest_3641 0.15 +1.1 3,802,669 - Psest_3641 0.18 +1.1 3,802,672 + Psest_3641 0.19 -1.3 3,802,672 + Psest_3641 0.19 +0.3 3,802,673 - Psest_3641 0.19 +0.6 3,802,673 - Psest_3641 0.19 -0.3 3,802,673 - Psest_3641 0.19 +0.5 3,802,673 - Psest_3641 0.19 -1.4 3,802,673 - Psest_3641 0.19 -0.2 3,802,673 - Psest_3641 0.19 +0.7 3,802,673 - Psest_3641 0.19 +0.4
Or see this region's nucleotide sequence