Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_3611

Experiment: D-Maltose (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntPsest_3609 and Psest_3610 are separated by 30 nucleotidesPsest_3610 and Psest_3611 are separated by 98 nucleotidesPsest_3611 and Psest_3612 are separated by 139 nucleotides Psest_3609: Psest_3609 - translation elongation factor EF-G, at 3,771,175 to 3,773,295 _3609 Psest_3610: Psest_3610 - ribosomal protein S7, bacterial/organelle, at 3,773,326 to 3,773,796 _3610 Psest_3611: Psest_3611 - ribosomal protein S12, bacterial/organelle, at 3,773,895 to 3,774,266 _3611 Psest_3612: Psest_3612 - DNA-directed RNA polymerase, beta' subunit, predominant form, at 3,774,406 to 3,778,605 _3612 Position (kb) 3773 3774 3775Strain fitness (log2 ratio) -2 -1 0 1at 3774.407 kb on + strandat 3774.407 kb on + strandat 3774.407 kb on + strandat 3774.408 kb on - strandat 3774.408 kb on - strandat 3774.408 kb on - strandat 3774.408 kb on - strandat 3774.408 kb on - strandat 3774.408 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction D-Maltose (C)
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3,774,407 + -0.9
3,774,407 + -2.2
3,774,407 + -1.1
3,774,408 - -1.2
3,774,408 - +0.2
3,774,408 - -1.9
3,774,408 - -1.5
3,774,408 - -2.3
3,774,408 - -1.1

Or see this region's nucleotide sequence