Experiment: D-Maltose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_3324 and Psest_3325 are separated by 138 nucleotides Psest_3325 and Psest_3326 overlap by 4 nucleotides Psest_3326 and Psest_3327 are separated by 135 nucleotides
Psest_3324: Psest_3324 - MAF protein, at 3,490,050 to 3,490,640
_3324
Psest_3325: Psest_3325 - rod shape-determining protein MreD, at 3,490,779 to 3,491,267
_3325
Psest_3326: Psest_3326 - rod shape-determining protein MreC, at 3,491,264 to 3,492,217
_3326
Psest_3327: Psest_3327 - cell shape determining protein, MreB/Mrl family, at 3,492,353 to 3,493,390
_3327
Position (kb)
3491
3492
3493 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 3490.281 kb on + strand, within Psest_3324 at 3490.282 kb on - strand, within Psest_3324 at 3490.282 kb on - strand, within Psest_3324 at 3490.282 kb on - strand, within Psest_3324 at 3490.282 kb on - strand, within Psest_3324 at 3490.440 kb on + strand, within Psest_3324 at 3490.440 kb on + strand, within Psest_3324 at 3490.440 kb on + strand, within Psest_3324 at 3490.441 kb on - strand, within Psest_3324 at 3490.441 kb on - strand, within Psest_3324 at 3490.441 kb on - strand, within Psest_3324 at 3490.441 kb on - strand, within Psest_3324 at 3490.441 kb on - strand, within Psest_3324 at 3490.441 kb on - strand, within Psest_3324 at 3490.441 kb on - strand, within Psest_3324 at 3490.441 kb on - strand, within Psest_3324 at 3490.510 kb on + strand, within Psest_3324 at 3490.510 kb on + strand, within Psest_3324 at 3490.510 kb on + strand, within Psest_3324 at 3490.510 kb on + strand, within Psest_3324 at 3490.510 kb on + strand, within Psest_3324 at 3490.510 kb on + strand, within Psest_3324 at 3490.510 kb on + strand, within Psest_3324 at 3490.511 kb on - strand, within Psest_3324 at 3490.511 kb on - strand, within Psest_3324 at 3490.581 kb on + strand, within Psest_3324 at 3490.581 kb on + strand, within Psest_3324 at 3490.581 kb on + strand, within Psest_3324 at 3490.581 kb on + strand, within Psest_3324 at 3490.582 kb on - strand at 3490.582 kb on - strand at 3490.582 kb on - strand at 3490.582 kb on - strand at 3490.582 kb on - strand at 3490.582 kb on - strand at 3490.582 kb on - strand at 3490.582 kb on - strand at 3490.582 kb on - strand at 3490.582 kb on - strand at 3490.582 kb on - strand at 3490.627 kb on + strand at 3490.627 kb on + strand at 3490.627 kb on + strand at 3490.627 kb on + strand at 3490.627 kb on + strand at 3490.627 kb on + strand at 3490.628 kb on - strand at 3490.628 kb on - strand at 3490.628 kb on - strand at 3490.628 kb on - strand at 3490.628 kb on - strand at 3490.658 kb on - strand at 3490.658 kb on - strand at 3490.662 kb on - strand at 3490.662 kb on - strand at 3490.662 kb on - strand at 3490.662 kb on - strand at 3490.662 kb on - strand at 3490.662 kb on - strand at 3490.715 kb on + strand at 3490.715 kb on + strand at 3490.783 kb on + strand at 3492.286 kb on - strand at 3492.286 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction D-Maltose (C) remove 3,490,281 + Psest_3324 0.39 +0.1 3,490,282 - Psest_3324 0.39 -0.7 3,490,282 - Psest_3324 0.39 -0.4 3,490,282 - Psest_3324 0.39 -0.1 3,490,282 - Psest_3324 0.39 -1.2 3,490,440 + Psest_3324 0.66 +0.4 3,490,440 + Psest_3324 0.66 +0.1 3,490,440 + Psest_3324 0.66 +0.9 3,490,441 - Psest_3324 0.66 -0.8 3,490,441 - Psest_3324 0.66 +0.5 3,490,441 - Psest_3324 0.66 +0.9 3,490,441 - Psest_3324 0.66 -1.7 3,490,441 - Psest_3324 0.66 +0.3 3,490,441 - Psest_3324 0.66 -1.3 3,490,441 - Psest_3324 0.66 -0.6 3,490,441 - Psest_3324 0.66 -0.9 3,490,510 + Psest_3324 0.78 -0.4 3,490,510 + Psest_3324 0.78 -0.6 3,490,510 + Psest_3324 0.78 +0.2 3,490,510 + Psest_3324 0.78 -0.1 3,490,510 + Psest_3324 0.78 -0.1 3,490,510 + Psest_3324 0.78 -1.5 3,490,510 + Psest_3324 0.78 -0.2 3,490,511 - Psest_3324 0.78 -0.1 3,490,511 - Psest_3324 0.78 -2.8 3,490,581 + Psest_3324 0.90 -0.7 3,490,581 + Psest_3324 0.90 -0.7 3,490,581 + Psest_3324 0.90 -0.1 3,490,581 + Psest_3324 0.90 -0.5 3,490,582 - -0.3 3,490,582 - -0.5 3,490,582 - -0.6 3,490,582 - +0.2 3,490,582 - -0.5 3,490,582 - +0.5 3,490,582 - +0.1 3,490,582 - +0.4 3,490,582 - -0.9 3,490,582 - -0.2 3,490,582 - -0.0 3,490,627 + +0.6 3,490,627 + -0.5 3,490,627 + +0.1 3,490,627 + +0.3 3,490,627 + +1.3 3,490,627 + +0.7 3,490,628 - +0.4 3,490,628 - +1.6 3,490,628 - +0.3 3,490,628 - -0.1 3,490,628 - -0.8 3,490,658 - -0.8 3,490,658 - -2.1 3,490,662 - -0.4 3,490,662 - -0.0 3,490,662 - -1.0 3,490,662 - +0.3 3,490,662 - -0.2 3,490,662 - -0.4 3,490,715 + -0.0 3,490,715 + +0.0 3,490,783 + -0.2 3,492,286 - +0.3 3,492,286 - +1.5
Or see this region's nucleotide sequence