Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_3267

Experiment: D-Maltose (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntPsest_3265 and Psest_3266 overlap by 4 nucleotidesPsest_3266 and Psest_3267 overlap by 4 nucleotidesPsest_3267 and Psest_3268 overlap by 4 nucleotides Psest_3265: Psest_3265 - Cell division protein FtsI/penicillin-binding protein 2, at 3,435,128 to 3,436,858 _3265 Psest_3266: Psest_3266 - cell division protein FtsL, at 3,436,855 to 3,437,145 _3266 Psest_3267: Psest_3267 - S-adenosyl-methyltransferase MraW, at 3,437,142 to 3,438,089 _3267 Psest_3268: Psest_3268 - mraZ protein, at 3,438,086 to 3,438,541 _3268 Position (kb) 3437 3438 3439Strain fitness (log2 ratio) -4 -3 -2 -1 0 1at 3437.149 kb on - strandat 3437.541 kb on - strand, within Psest_3267at 3438.095 kb on - strandat 3438.105 kb on - strandat 3438.105 kb on - strandat 3438.404 kb on - strand, within Psest_3268at 3438.404 kb on - strand, within Psest_3268at 3438.562 kb on - strandat 3438.578 kb on - strandat 3438.621 kb on - strandat 3438.686 kb on - strandat 3438.695 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction D-Maltose (C)
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3,437,149 - -1.4
3,437,541 - Psest_3267 0.42 -3.7
3,438,095 - -0.6
3,438,105 - -1.3
3,438,105 - -1.7
3,438,404 - Psest_3268 0.70 -0.1
3,438,404 - Psest_3268 0.70 -2.6
3,438,562 - -3.9
3,438,578 - -3.0
3,438,621 - -3.2
3,438,686 - -2.7
3,438,695 - -3.9

Or see this region's nucleotide sequence