Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_2834

Experiment: D-Maltose (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntPsest_2832 and Psest_2833 are separated by 1 nucleotidesPsest_2833 and Psest_2834 are separated by 50 nucleotidesPsest_2834 and Psest_2835 are separated by 69 nucleotides Psest_2832: Psest_2832 - UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, at 3,022,383 to 3,023,441 _2832 Psest_2833: Psest_2833 - Outer membrane protein, at 3,023,443 to 3,023,946 _2833 Psest_2834: Psest_2834 - outer membrane protein assembly complex, YaeT protein, at 3,023,997 to 3,026,348 _2834 Psest_2835: Psest_2835 - RIP metalloprotease RseP, at 3,026,418 to 3,027,770 _2835 Position (kb) 3023 3024 3025 3026 3027Strain fitness (log2 ratio) -1 0 1at 3023.999 kb on - strandat 3023.999 kb on - strandat 3023.999 kb on - strandat 3026.989 kb on - strand, within Psest_2835

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Per-strain Table

Position Strand Gene LocusTag Fraction D-Maltose (C)
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3,023,999 - +0.3
3,023,999 - +0.7
3,023,999 - +0.9
3,026,989 - Psest_2835 0.42 +0.4

Or see this region's nucleotide sequence