Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_2473

Experiment: D-Maltose (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntPsest_2471 and Psest_2472 are separated by 430 nucleotidesPsest_2472 and Psest_2473 are separated by 11 nucleotidesPsest_2473 and Psest_2474 are separated by 97 nucleotides Psest_2471: Psest_2471 - Glycerol-3-phosphate dehydrogenase, at 2,640,446 to 2,641,468 _2471 Psest_2472: Psest_2472 - beta-hydroxyacyl-[acyl carrier protein] dehydratase FabA, at 2,641,899 to 2,642,414 _2472 Psest_2473: Psest_2473 - 3-oxoacyl-(acyl-carrier-protein) synthase, at 2,642,426 to 2,643,643 _2473 Psest_2474: Psest_2474 - AraC-type DNA-binding domain-containing proteins, at 2,643,741 to 2,644,784 _2474 Position (kb) 2642 2643 2644Strain fitness (log2 ratio) -2 -1 0 1 2 3at 2641.514 kb on + strandat 2641.514 kb on + strandat 2641.514 kb on + strandat 2641.514 kb on + strandat 2641.514 kb on + strandat 2641.514 kb on + strandat 2641.515 kb on - strandat 2641.515 kb on - strandat 2641.515 kb on - strandat 2641.515 kb on - strandat 2641.515 kb on - strandat 2641.661 kb on + strandat 2641.662 kb on - strandat 2641.663 kb on + strandat 2641.709 kb on + strandat 2641.811 kb on + strandat 2641.811 kb on + strandat 2641.811 kb on + strandat 2641.811 kb on + strandat 2641.817 kb on + strandat 2641.817 kb on + strandat 2641.856 kb on + strandat 2641.856 kb on + strandat 2641.856 kb on + strandat 2641.856 kb on + strandat 2641.856 kb on + strandat 2641.856 kb on + strandat 2641.856 kb on + strandat 2644.024 kb on + strand, within Psest_2474at 2644.024 kb on + strand, within Psest_2474at 2644.025 kb on - strand, within Psest_2474at 2644.119 kb on + strand, within Psest_2474at 2644.172 kb on - strand, within Psest_2474at 2644.172 kb on - strand, within Psest_2474at 2644.172 kb on - strand, within Psest_2474at 2644.172 kb on - strand, within Psest_2474at 2644.172 kb on - strand, within Psest_2474at 2644.225 kb on + strand, within Psest_2474at 2644.450 kb on + strand, within Psest_2474at 2644.451 kb on - strand, within Psest_2474at 2644.451 kb on - strand, within Psest_2474at 2644.451 kb on - strand, within Psest_2474

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Per-strain Table

Position Strand Gene LocusTag Fraction D-Maltose (C)
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2,641,514 + -0.4
2,641,514 + +0.3
2,641,514 + -0.1
2,641,514 + -0.7
2,641,514 + -1.7
2,641,514 + -0.2
2,641,515 - +0.4
2,641,515 - -0.3
2,641,515 - +0.7
2,641,515 - +0.7
2,641,515 - +0.7
2,641,661 + -0.0
2,641,662 - +1.7
2,641,663 + +0.5
2,641,709 + +0.2
2,641,811 + -0.8
2,641,811 + +0.4
2,641,811 + -0.0
2,641,811 + +0.5
2,641,817 + -0.5
2,641,817 + -2.7
2,641,856 + -1.6
2,641,856 + -0.3
2,641,856 + -1.7
2,641,856 + +1.8
2,641,856 + +0.3
2,641,856 + +0.1
2,641,856 + +1.6
2,644,024 + Psest_2474 0.27 +0.6
2,644,024 + Psest_2474 0.27 -0.2
2,644,025 - Psest_2474 0.27 -0.9
2,644,119 + Psest_2474 0.36 -0.6
2,644,172 - Psest_2474 0.41 +0.0
2,644,172 - Psest_2474 0.41 +0.1
2,644,172 - Psest_2474 0.41 +1.1
2,644,172 - Psest_2474 0.41 +3.0
2,644,172 - Psest_2474 0.41 +0.2
2,644,225 + Psest_2474 0.46 +0.2
2,644,450 + Psest_2474 0.68 -0.4
2,644,451 - Psest_2474 0.68 +0.3
2,644,451 - Psest_2474 0.68 -0.5
2,644,451 - Psest_2474 0.68 +0.7

Or see this region's nucleotide sequence