Experiment: D-Maltose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_2392 and Psest_2393 are separated by 36 nucleotides Psest_2393 and Psest_2394 are separated by 79 nucleotides
Psest_2392: Psest_2392 - PAS domain S-box/diguanylate cyclase (GGDEF) domain, at 2,543,054 to 2,545,714
_2392
Psest_2393: Psest_2393 - ferrochelatase, at 2,545,751 to 2,546,776
_2393
Psest_2394: Psest_2394 - TIGR01777 family protein, at 2,546,856 to 2,547,758
_2394
Position (kb)
2545
2546
2547 Strain fitness (log2 ratio)
-1
0
1 at 2544.811 kb on + strand, within Psest_2392 at 2544.811 kb on + strand, within Psest_2392 at 2544.851 kb on + strand, within Psest_2392 at 2544.852 kb on - strand, within Psest_2392 at 2544.852 kb on - strand, within Psest_2392 at 2544.852 kb on - strand, within Psest_2392 at 2544.852 kb on - strand, within Psest_2392 at 2544.852 kb on - strand, within Psest_2392 at 2545.132 kb on - strand, within Psest_2392 at 2545.132 kb on - strand, within Psest_2392 at 2545.132 kb on - strand, within Psest_2392 at 2545.243 kb on - strand, within Psest_2392 at 2545.330 kb on + strand, within Psest_2392 at 2545.330 kb on + strand, within Psest_2392 at 2545.330 kb on + strand, within Psest_2392 at 2545.331 kb on - strand, within Psest_2392 at 2545.425 kb on - strand, within Psest_2392 at 2545.629 kb on - strand at 2547.097 kb on + strand, within Psest_2394 at 2547.098 kb on - strand, within Psest_2394 at 2547.098 kb on - strand, within Psest_2394 at 2547.409 kb on + strand, within Psest_2394 at 2547.639 kb on + strand, within Psest_2394 at 2547.639 kb on + strand, within Psest_2394 at 2547.639 kb on + strand, within Psest_2394 at 2547.639 kb on + strand, within Psest_2394 at 2547.640 kb on - strand, within Psest_2394 at 2547.640 kb on - strand, within Psest_2394 at 2547.640 kb on - strand, within Psest_2394 at 2547.640 kb on - strand, within Psest_2394 at 2547.640 kb on - strand, within Psest_2394 at 2547.711 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction D-Maltose (C) remove 2,544,811 + Psest_2392 0.66 +0.3 2,544,811 + Psest_2392 0.66 +1.2 2,544,851 + Psest_2392 0.68 -0.3 2,544,852 - Psest_2392 0.68 +0.3 2,544,852 - Psest_2392 0.68 -1.1 2,544,852 - Psest_2392 0.68 +1.0 2,544,852 - Psest_2392 0.68 +0.8 2,544,852 - Psest_2392 0.68 +0.0 2,545,132 - Psest_2392 0.78 +0.1 2,545,132 - Psest_2392 0.78 +0.1 2,545,132 - Psest_2392 0.78 +0.1 2,545,243 - Psest_2392 0.82 +0.6 2,545,330 + Psest_2392 0.86 +0.1 2,545,330 + Psest_2392 0.86 -0.5 2,545,330 + Psest_2392 0.86 +0.4 2,545,331 - Psest_2392 0.86 +0.0 2,545,425 - Psest_2392 0.89 +1.0 2,545,629 - -0.6 2,547,097 + Psest_2394 0.27 +0.9 2,547,098 - Psest_2394 0.27 -0.7 2,547,098 - Psest_2394 0.27 -1.0 2,547,409 + Psest_2394 0.61 -0.5 2,547,639 + Psest_2394 0.87 +0.1 2,547,639 + Psest_2394 0.87 -0.3 2,547,639 + Psest_2394 0.87 +0.3 2,547,639 + Psest_2394 0.87 +0.2 2,547,640 - Psest_2394 0.87 +0.7 2,547,640 - Psest_2394 0.87 -1.4 2,547,640 - Psest_2394 0.87 +0.5 2,547,640 - Psest_2394 0.87 -0.8 2,547,640 - Psest_2394 0.87 +0.6 2,547,711 + -0.2
Or see this region's nucleotide sequence