Experiment: D-Maltose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_2136 and Psest_2137 are separated by 110 nucleotides Psest_2137 and Psest_2138 are separated by 284 nucleotides
Psest_2136: Psest_2136 - Predicted homoserine dehydrogenase, at 2,272,403 to 2,273,635
_2136
Psest_2137: Psest_2137 - Uncharacterized membrane protein, putative virulence factor, at 2,273,746 to 2,275,212
_2137
Psest_2138: Psest_2138 - RND family efflux transporter, MFP subunit, at 2,275,497 to 2,276,738
_2138
Position (kb)
2273
2274
2275
2276 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 2272.834 kb on + strand, within Psest_2136 at 2272.835 kb on - strand, within Psest_2136 at 2273.090 kb on + strand, within Psest_2136 at 2273.090 kb on + strand, within Psest_2136 at 2273.171 kb on + strand, within Psest_2136 at 2273.171 kb on + strand, within Psest_2136 at 2273.171 kb on + strand, within Psest_2136 at 2273.172 kb on - strand, within Psest_2136 at 2273.172 kb on - strand, within Psest_2136 at 2273.181 kb on + strand, within Psest_2136 at 2273.181 kb on + strand, within Psest_2136 at 2273.182 kb on - strand, within Psest_2136 at 2273.199 kb on - strand, within Psest_2136 at 2273.199 kb on - strand, within Psest_2136 at 2273.287 kb on + strand, within Psest_2136 at 2273.424 kb on + strand, within Psest_2136 at 2273.425 kb on - strand, within Psest_2136 at 2273.615 kb on - strand at 2273.844 kb on - strand at 2275.350 kb on + strand at 2275.350 kb on + strand at 2275.350 kb on + strand at 2275.356 kb on + strand at 2275.356 kb on + strand at 2275.356 kb on + strand at 2275.356 kb on + strand at 2275.357 kb on - strand at 2275.357 kb on - strand at 2275.357 kb on - strand at 2275.357 kb on - strand at 2275.405 kb on + strand at 2275.405 kb on + strand at 2275.405 kb on + strand at 2275.405 kb on + strand at 2275.405 kb on + strand at 2275.405 kb on + strand at 2275.405 kb on + strand at 2275.405 kb on + strand at 2275.405 kb on + strand at 2275.405 kb on + strand at 2275.405 kb on + strand at 2275.405 kb on + strand at 2275.405 kb on + strand at 2275.405 kb on + strand at 2275.405 kb on + strand at 2275.405 kb on + strand at 2275.405 kb on + strand at 2275.405 kb on + strand at 2275.405 kb on + strand at 2275.405 kb on + strand at 2275.405 kb on + strand at 2275.405 kb on + strand at 2275.405 kb on + strand at 2275.405 kb on + strand at 2275.405 kb on + strand at 2275.405 kb on + strand at 2275.405 kb on + strand at 2275.405 kb on + strand at 2275.405 kb on + strand at 2275.405 kb on + strand at 2275.405 kb on + strand at 2275.405 kb on + strand at 2275.405 kb on + strand at 2275.406 kb on - strand at 2275.406 kb on - strand at 2275.406 kb on - strand at 2275.406 kb on - strand at 2275.406 kb on - strand at 2275.406 kb on - strand at 2275.406 kb on - strand at 2275.406 kb on - strand at 2275.406 kb on - strand at 2275.406 kb on - strand at 2275.406 kb on - strand at 2275.406 kb on - strand at 2275.406 kb on - strand at 2275.406 kb on - strand at 2275.406 kb on - strand at 2275.415 kb on + strand at 2275.462 kb on + strand at 2275.851 kb on + strand, within Psest_2138 at 2275.851 kb on + strand, within Psest_2138 at 2275.851 kb on + strand, within Psest_2138 at 2275.851 kb on + strand, within Psest_2138 at 2275.852 kb on - strand, within Psest_2138
Per-strain Table
Position Strand Gene LocusTag Fraction D-Maltose (C) remove 2,272,834 + Psest_2136 0.35 +1.1 2,272,835 - Psest_2136 0.35 +0.5 2,273,090 + Psest_2136 0.56 +0.9 2,273,090 + Psest_2136 0.56 +0.6 2,273,171 + Psest_2136 0.62 +0.4 2,273,171 + Psest_2136 0.62 +0.5 2,273,171 + Psest_2136 0.62 +0.9 2,273,172 - Psest_2136 0.62 +1.0 2,273,172 - Psest_2136 0.62 +0.5 2,273,181 + Psest_2136 0.63 -0.1 2,273,181 + Psest_2136 0.63 -0.1 2,273,182 - Psest_2136 0.63 +0.4 2,273,199 - Psest_2136 0.65 +0.4 2,273,199 - Psest_2136 0.65 +1.2 2,273,287 + Psest_2136 0.72 +0.4 2,273,424 + Psest_2136 0.83 +0.8 2,273,425 - Psest_2136 0.83 +0.3 2,273,615 - +1.7 2,273,844 - -1.2 2,275,350 + +1.1 2,275,350 + +0.6 2,275,350 + +0.7 2,275,356 + +0.2 2,275,356 + -0.1 2,275,356 + -0.2 2,275,356 + -0.9 2,275,357 - +0.1 2,275,357 - +0.1 2,275,357 - +0.9 2,275,357 - -2.8 2,275,405 + -0.6 2,275,405 + -0.5 2,275,405 + +0.1 2,275,405 + +0.1 2,275,405 + +1.8 2,275,405 + -0.4 2,275,405 + +0.1 2,275,405 + +0.9 2,275,405 + +0.5 2,275,405 + +0.2 2,275,405 + -2.3 2,275,405 + -0.1 2,275,405 + +0.1 2,275,405 + -0.9 2,275,405 + -0.5 2,275,405 + -0.1 2,275,405 + +0.5 2,275,405 + +0.1 2,275,405 + +1.0 2,275,405 + +0.5 2,275,405 + +0.8 2,275,405 + +0.1 2,275,405 + +0.1 2,275,405 + -0.0 2,275,405 + +1.6 2,275,405 + -0.2 2,275,405 + +0.2 2,275,405 + +0.1 2,275,405 + +1.0 2,275,405 + +2.1 2,275,405 + +0.3 2,275,405 + +1.6 2,275,405 + +1.1 2,275,406 - +1.7 2,275,406 - +0.6 2,275,406 - +0.5 2,275,406 - -0.3 2,275,406 - -0.8 2,275,406 - -0.2 2,275,406 - -0.7 2,275,406 - -1.1 2,275,406 - +0.8 2,275,406 - -0.2 2,275,406 - +0.5 2,275,406 - +0.7 2,275,406 - +0.5 2,275,406 - -0.0 2,275,406 - -0.8 2,275,415 + -1.2 2,275,462 + -0.4 2,275,851 + Psest_2138 0.29 +2.3 2,275,851 + Psest_2138 0.29 +0.8 2,275,851 + Psest_2138 0.29 +0.9 2,275,851 + Psest_2138 0.29 +0.1 2,275,852 - Psest_2138 0.29 -0.9
Or see this region's nucleotide sequence