Experiment: D-Maltose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_1038 and Psest_1039 are separated by 153 nucleotides Psest_1039 and Psest_1040 are separated by 54 nucleotides
Psest_1038: Psest_1038 - ketol-acid reductoisomerase, at 1,123,817 to 1,124,833
_1038
Psest_1039: Psest_1039 - CDP-diacylglycerol--serine O-phosphatidyltransferase, at 1,124,987 to 1,125,826
_1039
Psest_1040: Psest_1040 - Sulfite oxidase and related enzymes, at 1,125,881 to 1,126,888
_1040
Position (kb)
1124
1125
1126 Strain fitness (log2 ratio)
-1
0
1 at 1124.902 kb on + strand at 1124.962 kb on + strand at 1124.962 kb on + strand at 1124.962 kb on + strand at 1124.971 kb on + strand at 1124.971 kb on + strand at 1124.971 kb on + strand at 1126.151 kb on + strand, within Psest_1040 at 1126.151 kb on + strand, within Psest_1040 at 1126.152 kb on - strand, within Psest_1040 at 1126.496 kb on + strand, within Psest_1040 at 1126.496 kb on + strand, within Psest_1040 at 1126.496 kb on + strand, within Psest_1040 at 1126.497 kb on - strand, within Psest_1040 at 1126.497 kb on - strand, within Psest_1040 at 1126.555 kb on + strand, within Psest_1040 at 1126.555 kb on + strand, within Psest_1040 at 1126.555 kb on + strand, within Psest_1040 at 1126.556 kb on - strand, within Psest_1040 at 1126.559 kb on + strand, within Psest_1040 at 1126.559 kb on + strand, within Psest_1040 at 1126.560 kb on - strand, within Psest_1040 at 1126.560 kb on - strand, within Psest_1040 at 1126.560 kb on - strand, within Psest_1040 at 1126.560 kb on - strand, within Psest_1040 at 1126.560 kb on - strand, within Psest_1040 at 1126.560 kb on - strand, within Psest_1040 at 1126.560 kb on - strand, within Psest_1040 at 1126.619 kb on + strand, within Psest_1040 at 1126.619 kb on + strand, within Psest_1040 at 1126.662 kb on + strand, within Psest_1040 at 1126.662 kb on + strand, within Psest_1040 at 1126.718 kb on + strand, within Psest_1040 at 1126.718 kb on + strand, within Psest_1040 at 1126.718 kb on + strand, within Psest_1040 at 1126.741 kb on - strand, within Psest_1040 at 1126.786 kb on + strand, within Psest_1040 at 1126.786 kb on + strand, within Psest_1040 at 1126.787 kb on - strand, within Psest_1040
Per-strain Table
Position Strand Gene LocusTag Fraction D-Maltose (C) remove 1,124,902 + -0.7 1,124,962 + +0.1 1,124,962 + -0.4 1,124,962 + -0.1 1,124,971 + -1.4 1,124,971 + +0.2 1,124,971 + +0.9 1,126,151 + Psest_1040 0.27 +0.5 1,126,151 + Psest_1040 0.27 -0.2 1,126,152 - Psest_1040 0.27 +0.4 1,126,496 + Psest_1040 0.61 -1.0 1,126,496 + Psest_1040 0.61 +0.8 1,126,496 + Psest_1040 0.61 -1.3 1,126,497 - Psest_1040 0.61 -0.9 1,126,497 - Psest_1040 0.61 +0.4 1,126,555 + Psest_1040 0.67 -0.4 1,126,555 + Psest_1040 0.67 +0.5 1,126,555 + Psest_1040 0.67 +0.6 1,126,556 - Psest_1040 0.67 +0.0 1,126,559 + Psest_1040 0.67 +0.5 1,126,559 + Psest_1040 0.67 -0.8 1,126,560 - Psest_1040 0.67 +0.8 1,126,560 - Psest_1040 0.67 +0.2 1,126,560 - Psest_1040 0.67 +0.3 1,126,560 - Psest_1040 0.67 -1.0 1,126,560 - Psest_1040 0.67 +0.0 1,126,560 - Psest_1040 0.67 +0.2 1,126,560 - Psest_1040 0.67 +0.1 1,126,619 + Psest_1040 0.73 +0.5 1,126,619 + Psest_1040 0.73 +0.5 1,126,662 + Psest_1040 0.77 -0.7 1,126,662 + Psest_1040 0.77 +0.8 1,126,718 + Psest_1040 0.83 -0.0 1,126,718 + Psest_1040 0.83 -0.0 1,126,718 + Psest_1040 0.83 -0.3 1,126,741 - Psest_1040 0.85 +0.4 1,126,786 + Psest_1040 0.90 -0.6 1,126,786 + Psest_1040 0.90 -0.2 1,126,787 - Psest_1040 0.90 -0.6
Or see this region's nucleotide sequence