Specific Phenotypes for Pseudomonas fluorescens FW300-N2E3 in survival experiments

Condition Gene Description Fitness Cons.
AO353_00500 TonB box-like protein variable Yes
AO353_00585 cytochrome C oxidase Cbb3 -1.4  
AO353_00700 Cro/Cl family transcriptional regulator +3.4  
AO353_00895 2-methylcitrate synthase variable  
AO353_01075 hypothetical protein +1.7  
AO353_01305 hypothetical protein -1.4  
AO353_01645 hypothetical protein -1.4 Yes
AO353_02120 hypothetical protein +2.2  
AO353_02470 Cro/Cl family transcriptional regulator +2.4 Yes
AO353_02480 peptidylprolyl isomerase -1.9  
AO353_02580 Long-chain fatty acid transport protein +2.7  
AO353_02845 flagellar biosynthesis protein FlgE -2.2  
AO353_02855 flagellar basal-body rod protein FlgC -1.7  
AO353_02860 flagellar biosynthesis protein FlgB -2.9  
AO353_02865 chemotaxis protein -1.6  
AO353_02875 flagellar biosynthesis protein FlgA -1.7  
AO353_03115 TetR family transcriptional regulator +2.2  
AO353_04460 N-acetylglucosamine-specific PTS system, I, HPr, and IIA components (nagF) (from data) variable  
AO353_04465 N-acetylglucosamine-specific PTS system, IIBC components (nagE) (from data) +1.4  
AO353_05430 glycine/betaine ABC transporter substrate-binding protein -1.5  
AO353_05435 choline ABC transporter permease -1.4  
AO353_05440 glycine/betaine ABC transporter ATP-binding protein -1.6  
AO353_05780 AMP-dependent synthetase +2.7  
AO353_05840 dolichyl-phosphate-mannose-protein mannosyltransferase -2.0  
AO353_06345 histidine kinase +1.1  
AO353_07780 Carnitine ABC transporter, substrate-binding component CaiX (from data) variable  
AO353_07885 diguanylate cyclase variable  
AO353_08025 amino acid ABC transporter substrate-binding protein +2.1  
AO353_08080 chemotaxis protein -2.0  
AO353_08085 histidine kinase -1.4  
AO353_08540 alpha/beta hydrolase -1.7  
AO353_09025 nucleoside diphosphate kinase regulator +1.8  
AO353_10070 cell wall assembly protein -2.0  
AO353_10825 hypothetical protein -1.4  
AO353_11170 hypothetical protein -2.1  
AO353_12095 amino acid ABC transporter substrate-binding protein -1.5  
AO353_12845 peptide methionine sulfoxide reductase variable Yes
AO353_12850 diguanylate cyclase +1.3  
AO353_13005 channel protein TolC -1.7  
AO353_13090 flagellar motor stator protein MotA -1.1  
AO353_13945 ubiquinol oxidase subunit II -2.4 Yes
AO353_14025 diguanylate phosphodiesterase +1.7  
AO353_16170 histidine kinase +2.4  
AO353_16180 diguanylate cyclase variable  
AO353_16185 diguanylate cyclase +2.2  
AO353_16325 hypothetical protein +1.0  
AO353_16365 multidrug transporter AcrB -1.9  
AO353_16415 beta-(1-3)-glucosyl transferase -1.5  
AO353_17025 beta-agarase -1.7  
AO353_18595 flagellar biosynthesis protein FlgF -1.8 Yes
AO353_18605 flagellar basal body L-ring protein -1.6  
AO353_18610 flagellar biosynthesis protein FlgI -2.2  
AO353_18615 flagellar biosynthesis protein FlgJ -2.0  
AO353_18620 flagellar biosynthesis protein FlgK -1.6  
AO353_18625 flagellar biosynthesis protein FlgL -1.8  
AO353_18635 branched-chain alpha-keto acid dehydrogenase subunit E2 -2.0  
AO353_18645 flagellar cap protein FliD -2.0  
AO353_18650 flagellar export chaperone FliS -2.2  
AO353_18660 AAA family ATPase -2.5  
AO353_18665 histidine kinase -1.2  
AO353_18675 flagellar hook-basal body protein FliE -2.0  
AO353_18680 flagellar M-ring protein FliF -2.1  
AO353_18685 flagellar motor switch protein FliG -2.5  
AO353_18695 flagellar protein export ATPase FliI -1.5  
AO353_18720 flagellar hook-length control protein -1.5  
AO353_18725 flagellar basal body protein FliL -1.5  
AO353_18730 flagellar motor switch protein FliM -2.3  
AO353_18750 flagellar biosynthetic protein FliQ -1.7  
AO353_18755 flagellar biosynthetic protein FliR -2.0  
AO353_18760 flagellar biosynthetic protein FlhB -1.6  
AO353_18770 flagellar biosynthesis protein FlhA -1.8  
AO353_18785 flagellar biosynthesis sigma factor -2.7  
AO353_18790 histidine kinase -2.4  
AO353_18800 chemotaxis protein CheA -1.7  
AO353_18815 flagellar motor protein MotD -1.4  
AO353_18825 chemotaxis protein CheW -1.5  
AO353_19040 thioredoxin +1.6  
AO353_20380 acyl-CoA dehydrogenase +2.2  
AO353_21460 cation:proton antiporter +1.1  
AO353_21470 cation:proton antiporter variable  
AO353_23325 hypothetical protein -2.4  
AO353_23915 chemotaxis protein CheY -1.3 Yes
AO353_23925 histidine kinase +1.4 Yes
AO353_23975 diguanylate cyclase variable  
AO353_23980 sugar ABC transporter substrate-binding protein +1.8  
AO353_24025 ABC transporter ATP-binding protein -1.7  
AO353_24030 ABC transporter ATP-binding protein -1.8  
AO353_24035 iron ABC transporter permease -1.8  
AO353_24040 iron ABC transporter permease -2.4  
AO353_24050 ferric anguibactin-binding protein -1.4  
AO353_24055 ligand-gated channel protein -1.2  
AO353_25685 acetyl-CoA:acetyl-CoA C-acetyltransferase / acetyl-CoA:propanoyl-CoA 2-C-acetyltransferase (EC 2.3.1.9; EC 2.3.1.16) (from data) +4.3 Yes
AO353_27885 precorrin 6A synthase +1.1  
AO353_27895 isochorismatase -1.6  
AO353_27915 arginine N-succinyltransferase -1.3  
AO353_27930 LysR family transcriptional regulator +2.1  
AO353_27935 succinyl-CoA--3-ketoacid-CoA transferase +3.5  
AO353_27940 succinyl-CoA--3-ketoacid-CoA transferase variable