Specific Phenotypes for Herbaspirillum seropedicae SmR1 in stress experiments

Condition Gene Description Fitness Cons.
Cisplatin HSERO_RS00825 protease -1.6  
Cisplatin HSERO_RS02465 ATP-dependent DNA helicase RecQ -3.2 Yes
Cisplatin HSERO_RS04375 hypothetical protein +1.0  
Cisplatin HSERO_RS04540 head protein +1.3  
Cisplatin HSERO_RS04560 terminase +1.3  
Cisplatin HSERO_RS04565 bacteriophage capsid portal protein +1.2  
Cisplatin HSERO_RS04570 hypothetical protein +1.2  
Cisplatin HSERO_RS04605 hypothetical protein +1.3  
Cisplatin HSERO_RS04610 hypothetical protein +1.1  
Cisplatin HSERO_RS04615 hypothetical protein +1.0  
Cisplatin HSERO_RS06080 hypothetical protein -2.5  
Cisplatin HSERO_RS06150 cell division protein ZapA -2.9  
Cisplatin HSERO_RS06495 nuclease -2.6 Yes
Cisplatin HSERO_RS06500 ATP-dependent DNA helicase -1.3 Yes
Cisplatin HSERO_RS09690 excinuclease ABC subunit C -5.1 Yes
Cisplatin HSERO_RS10745 DNA repair protein RadA -2.8 Yes
Cisplatin HSERO_RS14570 DNA-binding protein -1.2  
Cisplatin HSERO_RS15180 transcription-repair coupling factor -3.4 Yes
Cisplatin HSERO_RS17265 glucosyltransferase MdoH +1.6  
Cisplatin HSERO_RS17270 glucan biosynthesis protein D +1.7  
Cisplatin HSERO_RS19810 excinuclease ABC subunit A -4.8 Yes
Cisplatin HSERO_RS20720 GMP synthase -2.4  
Cisplatin HSERO_RS20725 permease -2.3  
Cisplatin HSERO_RS20945 RNA-binding protein -1.7 Yes
Cobalt chloride hexahydrate HSERO_RS02000 magnesium transporter +4.2 Yes
Cobalt chloride hexahydrate HSERO_RS05435 hemolysin protein +2.5 Yes
Cobalt chloride hexahydrate HSERO_RS08385 anaerobic (selenocysteine-containing) formate dehydrogenase +1.2  
Cobalt chloride hexahydrate HSERO_RS10100 cation transporter -2.8 Yes
Cobalt chloride hexahydrate HSERO_RS15990 MarR family transcriptional regulator -2.2  
Cobalt chloride hexahydrate HSERO_RS16665 CDP-6-deoxy-delta-3,4-glucoseen reductase -1.9  
Cobalt chloride hexahydrate HSERO_RS18520 exporter -1.4  
Cobalt chloride hexahydrate HSERO_RS19810 excinuclease ABC subunit A -1.3  
Cobalt chloride hexahydrate HSERO_RS20725 permease -1.7  
Cobalt chloride hexahydrate HSERO_RS22980 membrane protein +1.8  
Dimethyl Sulfoxide HSERO_RS00925 porin -1.9  
Dimethyl Sulfoxide HSERO_RS10655 ribonuclease PH -1.3  
Fusidic acid sodium salt HSERO_RS02410 acriflavine resistance protein B -3.4 Yes
Fusidic acid sodium salt HSERO_RS02415 hemolysin D -3.0 Yes
Fusidic acid sodium salt HSERO_RS15990 MarR family transcriptional regulator +3.8  
Fusidic acid sodium salt HSERO_RS17315 ATP-dependent helicase -2.5 Yes
Fusidic acid sodium salt HSERO_RS19775 acriflavine resistance protein B +1.7  
Lomefloxacin hydrochloride HSERO_RS02410 acriflavine resistance protein B -4.4 Yes
Lomefloxacin hydrochloride HSERO_RS02415 hemolysin D -4.9 Yes
Lomefloxacin hydrochloride HSERO_RS03275 regulatory protein RecX -3.1 Yes
Lomefloxacin hydrochloride HSERO_RS04205 membrane protein +1.4  
Lomefloxacin hydrochloride HSERO_RS04535 tail protein X +1.5  
Lomefloxacin hydrochloride HSERO_RS05850 exodeoxyribonuclease VII large subunit -3.6 Yes
Lomefloxacin hydrochloride HSERO_RS16340 transcriptional regulator +1.5  
Lomefloxacin hydrochloride HSERO_RS18540 3-ketoacyl-ACP reductase +1.1  
Lomefloxacin hydrochloride HSERO_RS19775 acriflavine resistance protein B -3.9  
MreB Perturbing Compound A22 HSERO_RS02410 acriflavine resistance protein B -2.4  
MreB Perturbing Compound A22 HSERO_RS02415 hemolysin D -2.8  
MreB Perturbing Compound A22 HSERO_RS08045 preprotein translocase subunit TatB -1.8  
MreB Perturbing Compound A22 HSERO_RS17260 membrane protein variable  
MreB Perturbing Compound A22 HSERO_RS19775 acriflavine resistance protein B -1.4  
Nickel (II) chloride hexahydrate HSERO_RS01775 hypothetical protein +1.3 Yes
Nickel (II) chloride hexahydrate HSERO_RS02000 magnesium transporter +4.9 Yes
Nickel (II) chloride hexahydrate HSERO_RS02950 DNA methyltransferase -1.3  
Nickel (II) chloride hexahydrate HSERO_RS05435 hemolysin protein +2.8 Yes
Nickel (II) chloride hexahydrate HSERO_RS06150 cell division protein ZapA -1.3  
Nickel (II) chloride hexahydrate HSERO_RS10870 methionine aminopeptidase +1.8 Yes
Nickel (II) chloride hexahydrate HSERO_RS15990 MarR family transcriptional regulator -1.9  
Nickel (II) chloride hexahydrate HSERO_RS19140 Rieske (2Fe-2S) protein +1.4 Yes
Nickel (II) chloride hexahydrate HSERO_RS19810 excinuclease ABC subunit A -1.5  
Nickel (II) chloride hexahydrate HSERO_RS20720 GMP synthase -1.5  
Nickel (II) chloride hexahydrate HSERO_RS23925 multidrug ABC transporter ATP-binding protein -1.3  
Sisomicin sulfate salt HSERO_RS02410 acriflavine resistance protein B -3.5  
Sisomicin sulfate salt HSERO_RS02415 hemolysin D -4.7  
Sisomicin sulfate salt HSERO_RS10870 methionine aminopeptidase +1.5  
Sisomicin sulfate salt HSERO_RS14570 DNA-binding protein -1.5  
Sisomicin sulfate salt HSERO_RS17270 glucan biosynthesis protein D -1.9  
Sisomicin sulfate salt HSERO_RS19775 acriflavine resistance protein B -5.2  
Sodium Chloride HSERO_RS00975 alpha,alpha-trehalose-phosphate synthase -6.5 Yes
Sodium Chloride HSERO_RS09785 LuxR family transcriptional regulator -1.4  
Sodium Chloride HSERO_RS09795 carbon starvation protein A -1.6  
Sodium Chloride HSERO_RS16735 alcohol dehydrogenase -1.5  
Sodium Chloride HSERO_RS16740 GMC family oxidoreductase -1.5  
Sodium Chloride HSERO_RS16745 gluconate 2-dehydrogenase -1.7  
Sodium Chloride HSERO_RS20875 hypothetical protein -1.1  
Sodium nitrate HSERO_RS02950 DNA methyltransferase -1.5  
Sodium nitrate HSERO_RS03705 EvpB family type VI secretion protein +1.3  
Sodium nitrate HSERO_RS03720 type VI secretion protein +1.2  
Sodium nitrate HSERO_RS03730 ATPase +1.2  
Sodium nitrate HSERO_RS06150 cell division protein ZapA -2.0 Yes
Sodium nitrate HSERO_RS08765 hypothetical protein +1.2  
Sodium nitrate HSERO_RS19810 excinuclease ABC subunit A -1.3 Yes
Sodium nitrite HSERO_RS09565 nitrite efflux transporter, HPP family (from data) -1.5 Yes
Sodium nitrite HSERO_RS11610 NADH dehydrogenase -2.2  
Sodium nitrite HSERO_RS11615 hypothetical protein -2.8  
Thallium(I) acetate HSERO_RS02345 1-acyl-sn-glycerol-3-phosphate acyltransferase +1.4  
Thallium(I) acetate HSERO_RS02375 NAD-dependent dehydratase -1.6  
Thallium(I) acetate HSERO_RS10665 coproporphyrinogen III oxidase +1.4  
Thallium(I) acetate HSERO_RS19810 excinuclease ABC subunit A -1.3  
Thallium(I) acetate HSERO_RS20680 multidrug DMT transporter permease -1.8  
Thallium(I) acetate HSERO_RS20695 methyltransferase -1.7  
Thallium(I) acetate HSERO_RS21110 dTDP-glucose 4,6-dehydratase +2.0  
sodium fluoride HSERO_RS08765 hypothetical protein +1.6  
sodium fluoride HSERO_RS08770 membrane protein +1.5  
sodium fluoride HSERO_RS12335 voltage-gated chloride channel protein -4.6 Yes
sodium fluoride HSERO_RS16665 CDP-6-deoxy-delta-3,4-glucoseen reductase +1.0  
sodium fluoride HSERO_RS19810 excinuclease ABC subunit A -1.7 Yes